Activity
From 04 Mar 2013 to 02 Apr 2013
02 Apr 2013
- 23:18 Revision 1ea20ad8: removed trailing whitespace
- 19:32 Revision 465ecf0d: Correct gross error: getImag returned real part.
- 17:33 Documentation #224 (Resolved): shut down overnight Doxygen update
- - crontab entry disabled
- Doxygen and OpenGrok are now run by git post-receive hook
- TeamCity seems to depend on ... - 15:40 Bug #245 (Resolved): inconsistent fact 2*PI in FormFactorHemiSpheroid
- 15:40 Bug #245 (Sprint): inconsistent fact 2*PI in FormFactorHemiSpheroid
- 15:40 Bug #245 (Backlog): inconsistent fact 2*PI in FormFactorHemiSpheroid
- 15:35 Revision efc04100: correction of factor 2Pi for hemi spheroid form factor
- 09:39 Revision 7d20313c: remove again (still fighting with git)
31 Mar 2013
- 15:47 Revision aae98dd4: Merge branch 'j4' into develop
- 15:45 Revision 9f3662fe: git clean up
- 13:46 Revision 7966af12: still merging j3 and develop
- 11:41 Revision 36d50f78: Merge branch 'j3' into develop
- Conflicts:
Core/Tools/inc/MathFunctions.h - 11:35 Revision c22fc64d: Layout; confused about Transform3D.h
30 Mar 2013
- 13:17 Refactoring #233 (Resolved): Simplify Geometry classes
- Transforms are now methods of Transform3D instead of BasicVector3D.
This allows for meaningful inheritance Transform... - 13:12 Refactoring #233 (Sprint): Simplify Geometry classes
- 13:11 Refactoring #233 (Backlog): Simplify Geometry classes
- 13:09 Revision 53b0af74: Merge branch 'j2' into develop
- Status:
- python test_all.py C++ passes
- Python interface broken because .h-Files in Geometry changed
Conflicts:
C... - 12:35 Revision 83290bfb: Status:
- - speed as before
- App --isgisaxs07 shows huge difference, but fu.test passes - 11:51 Revision d914773d: corr error introduced in simplifying argument test
- 11:06 Revision 11f9db18: bug found and resolved (ParticleDecoration::clone did not copy transform).
29 Mar 2013
- 00:45 Bug #249 (Resolved): FunctionalTests: fitting from python works two times faster than fitting fro...
- 00:44 Refactoring #248 (Archived): PythonAPI: redesing Py++ boost::python API code generation and insta...
- * find the reason of huge memory consumption during automatic boost python code generation (pygccxml)
- 00:43 Testing #228 (Resolved): Add mesocrystal test in Functional TestCor and TestPyCore
- 00:43 Testing #228: Add mesocrystal test in Functional TestCor and TestPyCore
- This is new C++/python test which reproduce simulation of Elizabeth's sample, partly repeating ./App/TestMesocrystal2...
- 15:46 Testing #228: Add mesocrystal test in Functional TestCor and TestPyCore
- In the view of heavy refactoring of geometric classes, lead by Joachim, as well as possible migration to shared point...
- 00:40 Bug #229 (Resolved): PythonAPI: provide Py++ code generation under Linux
- 00:39 Bug #229: PythonAPI: provide Py++ code generation under Linux
- Technically it is done. But in fact, due to large memory consumption of python+gccxml, will work only on powerfull PC...
- 18:13 Bug #229 (Sprint): PythonAPI: provide Py++ code generation under Linux
- 00:37 Bug #247 (Resolved): PythonAPI: kvector algebra dissapeared from python
- 20:07 Bug #247 (Sprint): PythonAPI: kvector algebra dissapeared from python
- 20:07 Bug #247 (Archived): PythonAPI: kvector algebra dissapeared from python
- 23:34 Revision 546c735f: Attempt to make Py++ working from linux
- 23:16 Revision 2fef3fb6: MesoCrystal test is integrated into FunctionalTest collection
- 22:52 Revision d745647e: MesoCrystal Python functional test, kvector_t algebra is back thanks to manual...
- 19:49 Revision 18f07901: doxygenified
- 18:24 Revision 8257c607: MesoCrystal C++ functional test
- 17:29 Revision 036ece8b: Debugging ...
- Extended print() methods.
- 10:57 Revision 4950c88b: Enhancing introspection messages.
- Ex #09b still fails.
- 08:46 Feature #218 (Resolved): Provide python example of fitting using external ROOT
- 08:46 Feature #218: Provide python example of fitting using external ROOT
- It is done, at last. Two new functional tests, TestFit01 and TestFit02, are implemented in C++ and python and are the...
- 08:30 Revision a8a43fa4: Merge branch 'TestFit02' into develop
- Conflicts:
Core/Core.pro
Core/PythonAPI/src/FormFactorBox.pypp.cpp
Core/PythonAPI/src/FormFactorCrystal.pypp.cpp
... - 07:53 Revision 43040dae: TestFit02 works from python
28 Mar 2013
- 19:26 Revision 68d072c2: unit tests rok, fu test 09 fails
- 16:16 Revision b5389395: Finally OutputData can be modified in python via [] operator
- 11:42 Revision 21a8e8cc: use ITransform3D through shared_pointers only (not yet compiling)
- 11:01 Bug #246 (Resolved): PythonAPI: resolve bug with 32bit pointer type generated by Py++
- 11:00 Bug #246: PythonAPI: resolve bug with 32bit pointer type generated by Py++
- The problem:
To provide extended fitting from python we have to derive Python classes from C++'s ISampleBuilder. The...
27 Mar 2013
- 00:32 Revision 686a8761: still failing the test
- 23:45 Revision a8a36896: ctd: everyhing compiles, but fails test
- 23:14 Revision d48ee435: Patch for Py++ to pass pointer to ctype object into C++ with correct 64bit add...
- 22:24 Bug #246 (Sprint): PythonAPI: resolve bug with 32bit pointer type generated by Py++
- 22:23 Bug #246 (Archived): PythonAPI: resolve bug with 32bit pointer type generated by Py++
- 21:43 Revision 6b06b0fd: Transform3D splitted into interface class ITransform3D and
- specific implementation RotationZ_3D.
Raw material for all other transforms temporarily moved to
UnusedTransform3D.h.... - 19:40 Revision 1df532a5: Geometry API change ctd:
- transform method now in class Transform3D instead of BasicVector3D<>.
- 19:16 Revision a1e57e98: Geometry API changes ctd:
- 'transform' -> 'transformed', no longer in place
- 18:45 Revision 2175f394: Clean again after modification of KVectorTest.
- Modified API: 'rotate' -> 'rotated', which no longer operates in place.
- 17:23 Revision ff8d9e12: repaired rotateX() etc
- 17:08 Revision 12cdba9f: Additional NaN protection, check for correct refractive index, c-toe cleanup i...
- 16:34 Revision 039435bf: KVectorTest.BasicTransformation failed.
- 16:09 Revision dd6cc239: Remove unused methods from Geometry to prepare for simplifications.
- 15:01 Revision 144af269: Tentatively eliminate unused constructor().
- 14:45 Revision b605ad7a: Eliminate unused property "title" from INamed.
- Doxygen comments to normalizer classes.
- 14:21 Revision a5a99913: New TestFit02 for C++ functional tests
- 14:12 Revision 8dfa2743: Looking for NaN fixes
- 13:19 Revision f2497439: CONFIG+=BORNAGAIN_PYTHON moved into shared.pri
- 13:03 Revision ecbb9811: FPE throw machinery is moved into Core
- 12:26 Revision fb6403a2: Merge branch 'jwu' into develop
- Conflicts:
App/inc/FitSuiteObserverFactory.h
Core/Fitting/inc/FitSuite.h
Core/PythonAPI/src/Simulation.pypp.cpp
C... - 11:31 Revision d9527253: ctd
- 11:02 Revision 33bd5fd5: Change wording of brief class description to Qt usage:
- - 3rd person form: "Does" this or that.
- For all const methods that return something: "Returns" ...
- For boolean re... - 10:16 Refactoring #234: avoid templates - e.g. in integration wrapper MemberFunctionIntegrator.h
- Another remark, is that apart of technicalities, Integrator redesign is not the most urgent task. It does his job, fo...
- 09:08 Revision 3ba12b37: Doxygen comments, save an include.
26 Mar 2013
- 23:34 Revision 019d709c: Doxygen comments.
- 23:33 Revision f4f77a04: Doxygen comments ...
- 22:32 Revision 5083b12e: Doxygen comments.
- 19:58 Revision 6bb451ec: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 19:58 Revision 982595b6: Merge branch 'PyFitExample' into develop
- Conflicts:
App/inc/FitSuiteObserverFactory.h
App/src/FitSuiteObserverFactory.cpp
Core/Core.pro
Core/Tools/src/Out... - 18:53 Revision 05fecb2e: Merge branch 'jwu' into develop
- 18:52 Revision b7c63780: Doxygen, ...
- 17:54 Revision 6fa7311b: Refactoring in FitSuiteObservers (need for functional tests)
- 14:59 Revision 69c457ab: To switch branches
- 13:22 Revision bce1b368: Again forgotten files for test_all.py
- 13:20 Revision a3d856ea: Main file FunctionalTests/test_all.py which runs 4 kind of functional tests al...
- 12:45 Revision 3d39e493: Merge branch 'jwu' into develop
- 12:44 Revision 16dde97d: ctd
- 12:07 Revision ec9d4886: Doxygen comments, comments within Simulaion::run().
- 10:34 Bug #245 (Archived): inconsistent fact 2*PI in FormFactorHemiSpheroid
- I guess the factor should apply to both real and imaginary parts, or to none.
- 10:26 Revision d7d092ca: Merge branch 'jwu' into develop
- 10:22 Revision ed5e6022: Doxygen comments.
- 09:56 Revision 56225065: Forgotten files for TestFit01 functional test
- 09:55 Revision 2a6eec02: New Python and C++ functional test TestFit01
- 08:30 Revision b998aec9: public/protected/private indented by 1.
- 08:00 Revision c548255f: Repair of previous commit; compiles and executes.
- Doxygen comments.
25 Mar 2013
- 00:36 Revision b730be62: Corrections for last commit.
- Formfactors: integrand of imaginary part is real.
- 22:50 Revision 46fb2ca1: remove aliases for "alpha_f", "phi_f"
- 21:51 Revision e04312f6: Inconsistencies repaired?
- Transform reduced to 3x3 rotation.
- 21:41 Revision 2e275ad1: broken intermediate state
- 21:21 Revision a28c7676: revert
- 21:18 Revision 18d69a32: Doxygen comments.
- Tried removal of Rotate from Geometry which however is required by IsGISAXS07.
Will be reverted in a minuted. - 20:19 Revision 3005f11d: Guess contents of directory Examples/
- 19:58 Bug #243 (Rejected): App/App produces tons of warnings
- I deleted all Makefiles (in all subdirectories of BornAgain),
then I repeated qmake; make,
and the warnings were go... - 19:56 Bug #243 (Backlog): App/App produces tons of warnings
- 18:40 Revision 221aaa02: Merge branch 'jwu' into develop
- 18:39 Bug #244 (Resolved): OutputDataIOFactory: make consistent [x][y] axis ordering while writing/read...
- 14:40 Bug #244 (Sprint): OutputDataIOFactory: make consistent [x][y] axis ordering while writing/readin...
- 14:39 Bug #244 (Archived): OutputDataIOFactory: make consistent [x][y] axis ordering while writing/read...
- 18:38 Revision 47f92070: New OutputData write strategy, bug fix in OutputDataRead strategy
- 18:38 Revision df3755fa: analyzing contents of Examples/
- 18:08 Revision 48a798fe: Move performance log to dev-tools/log/.
- 17:58 Revision 67b43dab: - Reparametrize Doxygen
- - Correct little typos
- 17:25 Revision ee53f946: Doxygen comments.
- 14:47 Revision c8f084dc: rm temporary symlinks from pub/core
- 11:20 Revision c68b298a: Doxygen comments.
24 Mar 2013
- 22:15 Revision 74f16edf: Doxygen comments in App/inc
- 11:11 Revision 7462d747: script used just before
- 11:11 Revision f1e93d14: Merge branch 'jwu' into develop
- 11:01 Revision 3ced5f12: Standard headers for directory App, using script ed005.
- 10:03 Revision 33e0bc6c: Doxygen comments and minor layout editing
- 08:53 Bug #243 (Rejected): App/App produces tons of warnings
- after fresh compilation of the entire project, App/App produces tons of warnings.
$ uname -a
Linux h4 3.2.0-4-amd...
23 Mar 2013
- 18:49 Refactoring #242 (Archived): use GSL for random number sampling
- Why write GenerateStandardNormalRandom() ourselves?
See
http://www.gnu.org/software/gsl/manual/html_node/The-Gauss... - 18:38 Documentation #241 (Archived): simplify redmine workflow
- It must be possible at any moment to mark an issue as rejected or resolved or "in progress".
The workflow describe... - 14:11 Documentation #201 (Archived): insert pub/ into directory structure
- merged into #240 Renaming campaign.
- 14:05 Revision 03a15fc5: First performance from Joachim's Thinkpad l1 (impressively slow)
- 13:16 Refactoring #230 (Rejected): no CamelCase in Formfactor
- merged into #240
- 13:16 Refactoring #230 (Backlog): no CamelCase in Formfactor
- 13:15 Refactoring #240 (Backlog): Renaming campaign
- 13:10 Refactoring #240 (Rejected): Renaming campaign
- Bundle restructuring of directories and renaming of entities in a coordinated action, possibly between two sprints or...
- 13:04 Refactoring #233: Simplify Geometry classes
- Still to do: eliminate translational component from Transform3D.
- 13:02 Revision 4baf4475: first performance test on my home PC
- 10:31 Documentation #239: clean up redmine
- Is NSE.git still in use? Then give it a more explicit name.
- 10:00 Documentation #239: clean up redmine
- Project "IT Infrastructure" contains only wiki pages. Move them to our Dokuwiki.
- 09:59 Documentation #239 (Archived): clean up redmine
- Project "Scattering simulation framework" seems to be obsolete, right ?
- 09:50 Revision 4017a270: Merge branch 'jwu' into develop
22 Mar 2013
- 18:12 Revision 6816bd91: Code cleanup in *.pro files
- 18:10 Revision 0098c6b5: Doxygen comments.
- 17:49 Revision 05294d83: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- Conflicts:
Core/Core.pro
Examples/Performance/perf_history.txt
Fit/Fit.pro - 17:43 Revision 4411b532: repair permissions (chmod a-x)
- 17:37 Revision 17b60b0f: Updated python API
- 17:32 Revision 34bde621: Merge branch 'jwu' into develop
- 17:31 Revision 6537acd2: Remove Coordinate3D.h
- (typedef Geometry::BasicVector3D<int> IndexVector3D
now in ISelectionRule.h).
Class description for SimpleSelectio... - 17:07 Testing #228 (Sprint): Add mesocrystal test in Functional TestCor and TestPyCore
- 17:07 Testing #228 (Backlog): Add mesocrystal test in Functional TestCor and TestPyCore
- 16:34 Bug #237 (Resolved): replace "inline BasicVector3D<double> operator+" and similar by templated im...
- 16:33 Bug #237 (Sprint): replace "inline BasicVector3D<double> operator+" and similar by templated impl...
- 16:33 Bug #237 (Backlog): replace "inline BasicVector3D<double> operator+" and similar by templated imp...
- 16:32 Revision f1825bda: first performance test on Joachim's desktop PC (o2)
- 16:21 Revision e88e2ee5: Merge branch 'jwu' into develop
- 16:19 Revision 47cc3f73: Further simplify BasicVector3D.
- Forbid shorthand a*b, request a.dot(b) or dotProduct(a,b).
Remove "virtual" from ~BasicVector3D.
Provide templated im... - 16:10 Revision cace50aa: Bug fix with log(MSG::INFO), MessageService instead of MessageSvc
- 11:54 Revision 3f46de32: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 11:53 Revision 924f5aa8: Restored python functionality
- 11:45 Refactoring #233: Simplify Geometry classes
- We will not use CLHEP/Geometry in its present form as our generic library for 3D geometry. Therefore, I threw away th...
- 11:27 Revision 02ddfe81: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 11:13 Revision 9c6a8b94: Merge branch 'develop' into trythings
- Conflicts:
Fit/Fit.pro - 11:10 Revision a037e25c: outcomment CONFIG += BORNAGAIN_PYTHONCONFIG
- 11:06 Refactoring #234: avoid templates - e.g. in integration wrapper MemberFunctionIntegrator.h
- Just a remark on the use of templates in the case of MemberFunctionIntegrator:
The idea is that in an OO program, th... - 10:22 Revision ac531048: Merge branch 'develop' into trythings
- 10:20 Revision 8f7c86cb: Simplify Geometry profoundly by removing Vector, Normal, Point.
- Repair Python compilation by restoring default constructor in HomogeneousMaterial.h
21 Mar 2013
- 23:53 Bug #237: replace "inline BasicVector3D<double> operator+" and similar by templated implementation
- If I understand correctly, right now we have conversions int -> double -> int.
Performance tests will show whether... - 23:51 Bug #237 (Resolved): replace "inline BasicVector3D<double> operator+" and similar by templated im...
- I suspect this is the reason why BasicVector3D<int> causes tests to perform 5% slower than with old Coordinate3D<int>.
- 21:05 Revision d6cc1f60: Move typedef from .h to .cpp;
- Standard doxygen comments
- 20:49 Revision afb8f4c2: Merge branch 'trythings' into develop
- 20:48 Revision fe94f7d8: overwrite my edits by Gennady's version
- 20:16 Revision 8320f840: eliminate trivial implementation file HomogeneousMaterial.cpp;
- more work on class and method comments
- 18:39 Refactoring #236 (Rejected): multi-line comment style
- instead of this
// ******************************** //
// this is our multi line header
// another line
// ****... - 18:05 Refactoring #223 (Resolved): Get rid from instance() method for all singletons
- 14:53 Refactoring #223 (Sprint): Get rid from instance() method for all singletons
- 18:04 Revision cb2b394d: Removed instance() from python functional tests; ISingleton and MaterialManage...
- 17:43 Revision 7941d0d6: Remove instance() method from all factories
- 14:55 Revision d162e9b2: Stop tracking user specific BornAgain.pro.user
- 13:46 Documentation #235 (Backlog): Metrics for compile time and execution time
- 11:45 Documentation #235 (Archived): Metrics for compile time and execution time
- Provide metrics so that we can evaluate the effect of optimizations upon compile time and execution time.
Possible w... - 13:37 Bug #229 (Backlog): PythonAPI: provide Py++ code generation under Linux
- 10:10 Bug #229 (Archived): PythonAPI: provide Py++ code generation under Linux
- 13:28 Revision 2d9f208c: Doxygen comments ...
- 12:19 Revision 6da4f8be: Merge branch 'trythings' into develop
- 12:18 Revision e72df1f3: mostly class descriptions
- 12:05 Refactoring #227 (Resolved): Check replacement of Coordinate3D<int> by Geometry::BasicVector3D<int>
- 12:04 Refactoring #227 (Sprint): Check replacement of Coordinate3D<int> by Geometry::BasicVector3D<int>
- 12:04 Refactoring #227 (Backlog): Check replacement of Coordinate3D<int> by Geometry::BasicVector3D<int>
- 01:14 Refactoring #227 (Archived): Check replacement of Coordinate3D<int> by Geometry::BasicVector3D<int>
- If Coordinate3D.h in develop really works, then eliminate it altogether.
- 11:42 Revision 023039e7: PythonAPI is restored
- 11:27 Refactoring #234 (Rejected): avoid templates - e.g. in integration wrapper MemberFunctionIntegrat...
- To accelerate compilation, review use of class-valued templates.
Prefer static functions (file scope) over unneces... - 11:22 Refactoring #233 (Resolved): Simplify Geometry classes
- Seems, of the six include files (BasicVector3D.h Plane3D.h Transform3D.h Normal3D.h Point3D.h Vector3D.h) only two (B...
- 11:04 Revision 666a3886: + brief class description
- 11:02 Refactoring #232 (Archived): rename "min" and "max" in TRange, ...
- In my mind, "min" and "max" designate the lowest and highest value actually realized.
For the lowest and highest a... - 10:56 Refactoring #231 (Rejected): eliminate class TSampledRange
- combining a range and a number of whatever into one class appears rather arbitrary to me; it seems to be used only once.
- 10:55 Refactoring #230 (Rejected): no CamelCase in Formfactor
- Rename "FormFactor" into "Formfactor".
Concerns file and class names.
Rationale: Reserve CamelCase to split names... - 09:30 Testing #228 (Archived): Add mesocrystal test in Functional TestCor and TestPyCore
- 01:11 Bug #226 (Archived): check mathematics behind complex->complex usage of mag, magxy, dot, cross, c...
- Scalar product of complex vectors a,b usually is the real value a.conj*b.
What's the mathematics behind a function d... - 01:03 Revision 971118b0: Merge branch 'trythings' into develop
- 01:01 Revision 4b34b1ff: Temporarily restored complex->complex functs mag, magxy, cosTheta, dot, cross.
- Emptied Coordinate3D.h:
only use typedef Geometry::BasicVector3D<int> IndexVector3D;
20 Mar 2013
- 23:53 Documentation #197: Unified header comment for all source files
- Done for Core. TODO for App, .. ?
- 08:11 Documentation #197 (In Progress): Unified header comment for all source files
- done for Core except Core/Geometry
- 23:43 Revision aaefdf18: Merge branch 'trymore' into trythings
- 23:41 Revision 56f1b264: Get rid of annoying warning about unused double_min.
- Outcomment Python compilation.
Work on layout while studying code. - 22:51 Revision e0a5638c: typedef Geometry::BasicVector3D<int> IndexVector3D;
- to replace Coordinate3D<int>
- 21:34 Revision ad787b60: No magnitude, no dot product, no polar coordinates &c for complex vector
- (was mathematically incorrect).
Change order of compilation: basics first. - 20:51 Feature #60 (Resolved): Framework general: implement simple logging tool with control of output l...
- 20:05 Revision 346e48e5: Merge branch 'trythings' into develop
- 20:00 Revision 98cd61a1: correct file header comments
- 19:45 Revision ddfdf997: Remove unused transform from class Coordinate3D.
- Renounce use of delegating constructors to avoid warnings from pre-C++11.
Improve comments. - 19:04 Revision 0002df24: -std=c++98 instead of c++11 because of boost bugs
- 18:34 Revision 33c61ef3: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 18:30 Revision b69fe6bb: Mostly worked on Doxygen documentation.
- Removed duplicate function names (rho, r) from BasicVector3D.
- 18:11 Revision 78bdf4a6: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into LoggingSystem
- Conflicts:
Core/Fitting/src/FitSuite.cpp - 18:01 Revision 0b94f50e: BORNAGAIN_PYTHON switched on
- 17:57 Refactoring #225 (Rejected): Provide import of ProgramOptions (nthreads, level of logging) into l...
- To discuss... We need a way to propagate CoreOptions (number of threads, level of logging) into libBornAgainCore in t...
- 17:42 Revision 7aed5056: New command line option for App --msgsvc=VERBOSE (INFO, DEBUG, …)
- 16:53 Revision 048b6efe: Multiple standard output is switched to new MessageSvc
- 15:29 Revision a1134f39: New MessageSvc for simple logging mechanism, example of usage in TestMiscelaneous
- 14:06 Revision b106dc50: synchronization problem
- 14:04 Revision 759732d8: doxygenify CLHep/Geometry, for our usage called libgeo3d
- 10:12 Revision 402f3fca: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 10:12 Revision acff64bf: corr
- 10:00 Revision 666926e7: Return back two removed headers to make highly build happy.
- 09:36 Revision faa19b3f: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 09:36 Revision e2e91b50: Removed AppDict.cpp file from tracking
- 08:48 Revision 10a08766: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- Conflicts:
Core/mainpage.dox - 08:47 Revision 86fa4e31: REFERENCED_BY_RELATION and REFERENCES_RELATION switched on
- 08:47 Revision 0e4f09c0: provide Doxygen entry page
- 08:41 Revision 0dac665c: corr, sorry
- 08:39 Documentation #198 (Resolved): Contents for doxygen entry page
- Minimal contents provided (source: Core/mainpage.dox).
Ideas for further contents? - 08:38 Revision dd64c153: provide Doxygen entry page
- 08:16 Documentation #200 (In Progress): Doxygen comments for all classes
- 08:15 Documentation #224 (Resolved): shut down overnight Doxygen update
- and delete Doc/Doxygen, since we have a new Doxygen pipe using git hook post-receive.
Eliminate links to old URL; ... - 08:09 Documentation #205 (Resolved): Create script for patching source code files with info header
- Scripts are collected in new directory dev-tools/edit-scripts
19 Mar 2013
- 00:16 Revision 1ec8ae13: REFERENCED_BY_RELATION and REFERENCES_RELATION switched on
- 00:13 Revision 63669d58: minor edits while reading
- 00:01 Revision 14e19782: corr comm
- 23:57 Revision 6d046826: last attempt
- 23:55 Revision 28839492: this form assumes fixed order (homepage first)
- 23:52 Revision 053e11b6: try other form of ALIASES
- 23:46 Revision 039ea274: insert "http://" in @homepage command
- 23:41 Revision 2221a2d1: back to standard form
- 23:40 Revision 297639a0: try other form of ALIASES
- 23:36 Revision 720c28cf: improve class and function descriptions
- 23:21 Revision 5f64f839: corr file and class descriptions
- 23:16 Revision c4b37ffe: corr Doxygen exclude pattern to exclude all Py++ productions
- 23:15 Revision 4f55d7df: eliminate some redundant includes
- 23:10 Revision 9406d688: corr brief file description
- 22:16 Revision 544db32f: Doxyfile: automatic update to version 1.8.1.2
- 20:39 Feature #217 (Resolved): Provide libBornAgainFitCore with ROOT minimizer wrappers
- 19:13 Revision cafc4e6d: manual comment edits
- 18:39 Revision 018cc935: repair file paths for immediate use in Doxygen
- 18:32 Revision 41aa599c: ctd.
- 18:29 Revision 82a68745: start removal of unnecessary includes
- 18:21 Revision 975c0d3a: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 18:20 Revision 6b446862: manual post-processing: more uniform comments, indentation, ..
- 18:13 Revision 840af596: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- Conflicts:
App/src/AppDict.cpp - 18:06 Revision a7f74c14: App is adapted to libBornAgainFit library
- 17:55 Revision 09995f2f: rearranged all headers to satisfy Doxygen which require @file to come first
- 17:54 Revision 15af82f3: First working version of libBornAgainFit library with interface to python
- 17:46 Revision dc459a69: prepare rearrangement of header blocks
- 17:29 Revision 609126a2: header block insertion completed (except for Geometry, which is a special case...
- 15:44 Revision cf23eddc: new directory dev-tools/edit-scripts (outside public distribution) to collect ...
- 15:39 Revision 1a1067ce: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 15:38 Revision e8fe59ea: Insert new header comment block, remove old one, manually improve file comment...
- 15:16 Revision bde3b5bf: Added normalization to GUI simulation
- 15:08 Revision 09daa71f: Removed commented code
- 14:56 Revision 41620d7e: output to ../../html
- 14:43 Revision b83db358: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 14:43 Revision 06cd01ad: Changed url for welcome screen
- 14:41 Revision 975c5fe5: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 14:40 Revision 22a7e251: Insert new header comment block, remove old one, manually improve file comment...
- 14:40 Feature #219 (Resolved): Provide python script editing in GUI
- 14:38 Revision 3a2e2c5c: Merge branch 'pyscript_edit_GUI' into develop
- 14:36 Revision db1d6d93: Added syntax highlighter to python script edit view in GUI
- 13:09 Revision 39ed498d: Insert new header comment block, remove old one, manually improve file comment...
- 12:50 Feature #222 (Backlog): PythonAPI: provide import of OutputData class from numpy array
- 12:49 Feature #222 (Rejected): PythonAPI: provide import of OutputData class from numpy array
- 12:50 Refactoring #223 (Archived): Get rid from instance() method for all singletons
- 12:40 Revision f6c5bc0c: Added simulation of user-defined python script samples
- 12:03 Revision 2d3debc5: Insert new header comment block, remove old one, manually improve file comment...
- 11:40 Revision bb1bb760: inserted header comment block, removed old dummy comment block,
- manual editing of @brief ("defines ...", "implements ..."), removed multiple white lines
- 11:28 Feature #60 (Sprint): Framework general: implement simple logging tool with control of output level
- 10:56 Revision b6574c56: Added python script icon
- 10:00 Revision 805f6ae3: Added PyScriptView for editing Python scripts
- 10:00 Revision 4d660ada: Remove AppDict.h from repository
- 10:00 Revision 222239ec: Update JobView graphics only when switching to this view
18 Mar 2013
- 15:32 Revision ba6a5e2d: Removed AppDict.cpp from repository
- 15:12 Refactoring #204 (Sprint): Implement ISampleVisitor
- 15:12 Refactoring #204 (Backlog): Implement ISampleVisitor
- 15:12 Testing #209 (Sprint): Run valgrind on all FunctionalTests
- 15:11 Documentation #212 (Sprint): Write description of isgisaxs01 example for User Manual using latex
- 15:11 Bug #214 (Sprint): Weird double delete somewhere in boost/gzip while runing functional tests on m...
- 11:29 Bug #214 (Backlog): Weird double delete somewhere in boost/gzip while runing functional tests on ...
- 15:11 Feature #217 (Sprint): Provide libBornAgainFitCore with ROOT minimizer wrappers
- 15:11 Feature #218 (Sprint): Provide python example of fitting using external ROOT
- 15:00 Revision cf4f577d: Merge branch 'master' of apps.jcns.fz-juelich.de:BornAgain
- 14:54 Bug #220 (Sprint): Gui: provide GUI compilation under Qt5/linux
- 14:35 Bug #220 (Archived): Gui: provide GUI compilation under Qt5/linux
- The problem is, again, in qtroot wrapper, which is not fully ported to Qt5 under X11. The current problem is in absen...
- 14:41 Documentation #206 (Archived): Repair class diagram on apps server
- 14:41 Bug #207 (Archived): PythonAPI: resolve problem with duplications in automatically generated boos...
- 14:41 Bug #213 (Archived): Fix wrong measurements of CPU while running C++ FunctionalTests using test_a...
- 14:41 Bug #193 (Archived): Fix GUI resizing on moving application in jobview
- 14:41 Feature #194 (Archived): Implement job threads using QtConcurrent instead of QThread
- 14:41 Feature #195 (Archived): Make welcome page of GUI link to BornAgain website using Qt WebKit
- 14:41 Documentation #196 (Archived): Create nice plot with gisaxs geometry
- 14:41 Bug #202 (Archived): cannot link under debian/wheezy: libMinuit2 not found
- 14:41 Feature #203 (Archived): Building: provide check for set of available ROOT libraries
- 14:41 Documentation #184 (Archived): Prepare talk for HDRI workshop
- 14:41 Feature #185 (Archived): Link job outputs to GUI
- 14:41 Feature #186 (Archived): Create prototype python scripting for GUI
- 14:41 Documentation #187 (Archived): Prepare poster for ADD2013 conference
- 14:39 Documentation #187 (Resolved): Prepare poster for ADD2013 conference
- 14:41 Feature #190 (Archived): Gui: provide opengl QtRoot part compiled under Qt5
- 14:41 Feature #192 (Archived): Prevent rebuilding of root histograms in jobview
- 14:41 Feature #175 (Archived): Add all IsGISAXS examples to python functional tests
- 14:41 Feature #179 (Archived): Link Core library to GUI
- 14:41 Feature #181 (Archived): Link InstrumentView to SimulationDataModel
- 14:41 Feature #182 (Archived): Link SimulationView to SimulationDataModel
- 14:41 Feature #183 (Archived): Gui: make access to icons through common resource file
- 14:41 Feature #172 (Archived): Gui prototype: implement ToolBox (layers, form factors) prototype for Sa...
- 14:02 Revision 3a7f6f19: Python setup is moved in shared.pri, separate directories for release/debug *....
- 11:36 Revision 0bd1b57e: ROOT dependencies are moved in shared.pri
- 11:20 Feature #188: GUI for sample definition (design and implement prototype)
- Postponing this issue until the end of workshop
- 11:19 Bug #191: Gui: improve performance of TQtWidget in the case of CONT4Z option
- For the moment it is possible to increase performance by 20% using code modification in TGQt::DrawFillArea(int n, TPo...
15 Mar 2013
- 13:23 Revision 4c35461b: Removed executable from git tracking
- 13:06 Revision f958c365: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- Conflicts:
App/App.pro - 12:57 Feature #219 (Sprint): Provide python script editing in GUI
- 12:57 Feature #219 (Archived): Provide python script editing in GUI
- 12:49 Feature #218 (Archived): Provide python example of fitting using external ROOT
- 12:45 Bug #214 (Sprint): Weird double delete somewhere in boost/gzip while runing functional tests on m...
- 12:45 Bug #214 (Backlog): Weird double delete somewhere in boost/gzip while runing functional tests on ...
- 12:45 Feature #217 (Archived): Provide libBornAgainFitCore with ROOT minimizer wrappers
- 12:37 Documentation #216 (Archived): Provide how to install for minimal installations of: Debian wheezy
- resolved in two ways:
- installation instructions using .deb packages
- CMake build instructions - 12:34 Documentation #205: Create script for patching source code files with info header
- goes along with #197
- 12:33 Documentation #197: Unified header comment for all source files
- 12:30 Documentation #215 (Archived): give advise on minimal ROOT compilation
- With new CMake built instructions, this is basically done. Most options can be switched OFF. At present, only the fol...
- 09:52 Documentation #196 (Resolved): Create nice plot with gisaxs geometry
14 Mar 2013
- 23:21 Documentation #199: uniform use of "bornagain" in all project pages and URLs
- - done inside Redmine
- done inside Doxygen (improved config file in pub/core)
- still TODO: move Doxygen from http... - 23:04 Revision f02b8d23: correct title
- 20:06 Revision 80ebe492: update project name and summary line in Doxyfile
- 18:41 Revision 51205e46: Merge branch 'building' into develop
- App/App.pro simplified by using ROOT's root-config to determine ROOT's
installation directory; environment variable $... - 18:36 Revision 07740845: Merge branch 'autotool2' into develop
- Directory pub/core contains
- symbolic link to .cpp and .h files in Core/*/src and Core/*/inc
- configure.ac, Makefil... - 18:25 Revision 28dc667b: autotools support for core basically works;
- TODO: check for external dependencies; no absolute path for python2.7
- 17:01 Revision 25734169: Added icon for JobView window
- 10:16 Documentation #216 (Archived): Provide how to install for minimal installations of: Debian wheezy
13 Mar 2013
- 19:48 Revision 54b509a9: simplified qmake input App/App.pro
- 15:52 Revision cd3c0ee2: Fix to compile under Qt5
- 14:49 Documentation #196 (Sprint): Create nice plot with gisaxs geometry
- 14:49 Bug #207 (Resolved): PythonAPI: resolve problem with duplications in automatically generated boos...
- 14:48 Feature #175 (Resolved): Add all IsGISAXS examples to python functional tests
- 14:48 Revision 74c56ab6: Merge branch 'pythonapi' into develop
- Conflicts:
App/App.pro - 14:45 Revision c83e14b4: PythonAPI, part II, now all isgisaxs functional tests (11 tests total) are exp...
- 14:41 Bug #213 (Resolved): Fix wrong measurements of CPU while running C++ FunctionalTests using test_a...
- 14:41 Bug #213 (Sprint): Fix wrong measurements of CPU while running C++ FunctionalTests using test_all.py
- 12:35 Revision 8d25b28b: Simplified App/qmake, based on the requirement that root-config is in PATH
- 11:14 Revision 042bf5be: Lattice2DIFParameter now is a class, InterferenceFunction2DLattice is protecte...
- 10:29 Revision 15bd24d0: orthography
12 Mar 2013
- 23:36 Documentation #215 (Archived): give advise on minimal ROOT compilation
- In apps.jcns.fz-juelich.de/doku/sc/bornagain:installing_root we should describe how to compile ROOT with minimum prer...
- 23:26 Bug #214 (Archived): Weird double delete somewhere in boost/gzip while runing functional tests on...
- 23:22 Bug #213 (Archived): Fix wrong measurements of CPU while running C++ FunctionalTests using test_a...
- 22:43 Revision 3dd3a837: Fix for catching isnan exception under linux
- 22:15 Revision 9b539d8c: Bugfix in all functional tests to handle nan case, gsl_error_handler_off() mov...
- 20:53 Documentation #212 (Resolved): Write description of isgisaxs01 example for User Manual using latex
- 17:09 Bug #193 (Resolved): Fix GUI resizing on moving application in jobview
- 17:02 Revision 0e19fccf: Fix GUI resizing on moving application in jobview
- 15:58 Feature #192 (Resolved): Prevent rebuilding of root histograms in jobview
- the histogram is now cached inside JobModel object
- 15:57 Revision f756377f: Merge branch 'GUI_histograms' into develop
- 15:57 Revision 63f2cbf3: Fixed rebuilding of root histograms in job view and fixed <QtWidgets> include
- 11:30 Revision aaf97de9: Heavy code cleanup in all FunctionalTests
- 10:44 Refactoring #211 (Rejected): Get rid from fixRatioBetweenParameters in parameter pool by introduc...
- 10:02 Testing #209 (Archived): Run valgrind on all FunctionalTests
11 Mar 2013
- 17:30 Revision 45d4d8b5: Restored pythonAPI, Part I.
- 15:22 Documentation #206 (Resolved): Repair class diagram on apps server
- 15:22 Documentation #206 (Sprint): Repair class diagram on apps server
- 15:22 Documentation #206 (Backlog): Repair class diagram on apps server
- 12:54 Documentation #206 (Archived): Repair class diagram on apps server
- 15:11 Revision 7efa358f: Commit to switch branch
- 15:10 Revision eedbbf65: Merge branch 'pythonexamples' into develop
- 15:08 Revision 3e7db5cb: Problem with failed functional tests solved.
- 14:01 Revision 34ceae61: Added license, install and change log files
- 13:26 Bug #207 (Sprint): PythonAPI: resolve problem with duplications in automatically generated boost/...
- 13:26 Bug #207 (Archived): PythonAPI: resolve problem with duplications in automatically generated boos...
- 13:15 Revision f2561fb1: Merge branch 'pythonexamples' into develop
- 13:13 Revision 46bd319a: Python examples 8, 9 and 10 are ready.
- 12:39 Documentation #205 (Resolved): Create script for patching source code files with info header
10 Mar 2013
- 21:39 Refactoring #204 (Archived): Implement ISampleVisitor
- 19:13 Bug #202 (Resolved): cannot link under debian/wheezy: libMinuit2 not found
- 19:13 Bug #202 (Sprint): cannot link under debian/wheezy: libMinuit2 not found
- 19:12 Bug #202 (Backlog): cannot link under debian/wheezy: libMinuit2 not found
- ROOT has to be configured with
./configure --all option
to bring additional minimizer libraries. I have added check... - 19:12 Feature #203 (Resolved): Building: provide check for set of available ROOT libraries
- 16:22 Feature #203 (Sprint): Building: provide check for set of available ROOT libraries
- 16:22 Feature #203 (Archived): Building: provide check for set of available ROOT libraries
- 19:09 Revision 1684e827: Merge branch 'gui_sampleview' into develop
- 19:09 Revision 9fb249bb: Delay in TQtWidget redrawing
- 18:00 Revision f410ddec: New check for existence of root libraries before compilation, new and unfinish...
09 Mar 2013
- 00:53 Bug #202 (Archived): cannot link under debian/wheezy: libMinuit2 not found
- cd App/ && make -f Makefile
make[1]: Entering directory `/home/jwu/BornAgain/App'
g++ -m64 -Wl,-O1 -o App obj/IsGI... - 14:09 Documentation #199: uniform use of "bornagain" in all project pages and URLs
- then update links in wiki (http://apps.jcns.fz-juelich.de/doku/sc/bornagain:start, ?)
- 11:04 Documentation #199 (Archived): uniform use of "bornagain" in all project pages and URLs
- http://apps.jcns.fz-juelich.de/redmine/projects/gisasframework/
http://apps.jcns.fz-juelich.de/gisas/doc/api/ with h... - 11:26 Documentation #201 (Archived): insert pub/ into directory structure
- to prepare for a source release, I propose to insert a directory level
BornAgain/pub
Move everything from pre... - 11:11 Documentation #200 (Rejected): Doxygen comments for all classes
- Write missing doxygen comments for classes, method, member variables.
Unify the wording.
Follow conventions of Qt.
... - 10:51 Documentation #198 (Resolved): Contents for doxygen entry page
- Do something like
http://apps.jcns.fz-juelich.de/doxy/frida/frida2_8cpp_source.html
to obtain something like
h... - 10:49 Documentation #197 (Archived): Unified header comment for all source files
- Mostly done for Core.
Extend to GUI and to Tests. Postponed while waiting for possible restructuring.
08 Mar 2013
- 12:43 Feature #194 (Resolved): Implement job threads using QtConcurrent instead of QThread
- 12:42 Revision 202b2c1b: Fixed include
- 12:36 Revision 0d39b8e0: Merge branch 'QtConcurrent' into develop
- 12:35 Revision 60de18f2: Implement GUI job threads with QtConcurrent
- 11:53 Revision 9932ac7e: Merge branch 'gui_sampleview' into develop
- Conflicts:
GUI/coregui/coregui.pro - 11:48 Revision 4d629008: First implementation of SampleEditor window
07 Mar 2013
- 15:02 Revision 1d9e9c5a: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 14:58 Revision c951ccbd: Links in GUI Welcome screen are now handled by external browser
- 14:23 Documentation #196 (Archived): Create nice plot with gisaxs geometry
- 13:42 Feature #190 (Resolved): Gui: provide opengl QtRoot part compiled under Qt5
- 13:40 Revision 3cd3d088: Merge branch 'gui_sample_widget' into develop
- 13:40 Revision c7211cff: Added delay to TQtWidget to make resize of widget smooth and taking less CPU (...
- 13:33 Feature #195 (Resolved): Make welcome page of GUI link to BornAgain website using Qt WebKit
- 13:32 Feature #195 (Sprint): Make welcome page of GUI link to BornAgain website using Qt WebKit
- 13:32 Feature #195 (Archived): Make welcome page of GUI link to BornAgain website using Qt WebKit
- 13:33 Revision ef949b54: Make welcome page of GUI link to BornAgain website using Qt WebKit
- 12:55 Feature #194 (Sprint): Implement job threads using QtConcurrent instead of QThread
- 12:55 Feature #194 (Archived): Implement job threads using QtConcurrent instead of QThread
06 Mar 2013
- 15:49 Bug #193 (Sprint): Fix GUI resizing on moving application in jobview
- 15:49 Bug #193 (Archived): Fix GUI resizing on moving application in jobview
- 15:35 Feature #192 (Sprint): Prevent rebuilding of root histograms in jobview
- 15:35 Feature #192 (Backlog): Prevent rebuilding of root histograms in jobview
- 15:35 Feature #192 (Archived): Prevent rebuilding of root histograms in jobview
- Make a cached dictionary of jobs and their histograms
- 15:27 Feature #190 (Sprint): Gui: provide opengl QtRoot part compiled under Qt5
- 15:21 Feature #190 (Backlog): Gui: provide opengl QtRoot part compiled under Qt5
- 15:27 Bug #191 (Sprint): Gui: improve performance of TQtWidget in the case of CONT4Z option
- 15:20 Bug #191 (Backlog): Gui: improve performance of TQtWidget in the case of CONT4Z option
- 15:19 Bug #191 (Rejected): Gui: improve performance of TQtWidget in the case of CONT4Z option
05 Mar 2013
- 12:52 Revision e356382b: Useless commit to switch branch
- 12:24 Feature #190 (Archived): Gui: provide opengl QtRoot part compiled under Qt5
- 12:23 Feature #189 (Rejected): GUI: implement prototype(s), decide about architecture
- This is the parent of all GUI-related issues: We need to choose an architecture before investing any further effort i...
- 12:22 Documentation #184 (Resolved): Prepare talk for HDRI workshop
04 Mar 2013
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