Activity

From 05 Jul 2013 to 03 Aug 2013

31 Jul 2013

11:46 Bug #340 (Resolved): Fix zero eigenvalue case for specular magnetic case
herck
11:45 Revision e0f9dbbf: Merge branch 'magneticZeroLambda' into develop
herck
11:44 Revision b9bda0b7: Took care of zero eigenvalues in magnetic matrix calculation
herck

30 Jul 2013

17:52 Bug #340 (Resolved): Fix zero eigenvalue case for specular magnetic case
herck
17:50 Feature #325 (Resolved): Develop MatrixSpecular for magnetic materials
herck
17:48 Revision 8fec2e4f: Merge branch 'magneticSpecular' into develop
Conflicts:
App/src/FunctionalTestFactory.cpp
herck
17:30 Revision 687b8156: Added functional test for specular magnetic and removed errors in the calculation
herck
15:32 Revision c336d749: Simple script for making tarball
pospelov
15:31 Feature #337 (Rejected): cmake: implement CPack generation of tgz archive
pospelov
15:31 Feature #337: cmake: implement CPack generation of tgz archive

For the moment I wrote simple script in
dev-tools/packaging
pospelov
14:59 Bug #339 (Resolved): crash on addInterferenceFunction() without any error message
pospelov
14:58 Bug #339: crash on addInterferenceFunction() without any error message

Fixed. Now in release 0.8.2.
Please note that in this release we switched conventions for Particle() object to a...
pospelov
14:46 Revision 48cbc8c7: Merge branch 'release-0.8.2'
pospelov
14:45 Revision a800709c: Preparing release 0.8.2
pospelov
14:35 Revision acd70472: First version of complete specular calculation for magnetic systems
herck
14:33 Bug #338 (Resolved): Strange warning in boost::python api generation
pospelov
14:33 Bug #338: Strange warning in boost::python api generation
Ok, seems to be normal behavior. Indeed, Layer_wrapper : public Layer
from Layer.pypp.cpp implements only
setDecor...
pospelov
13:56 Revision 9554f164: Merge branch 'ParticleUnitTestAndOther'
pospelov
13:55 Revision 56ceacc9: Version number propagated to PythonAPI
pospelov

29 Jul 2013

18:15 Revision 2e4a8c53: Version number moved in Core
pospelov
17:51 Revision d6b6754f: User examples modified to correspond to changes in IParticle
pospelov
17:40 Revision 21b1dc51: Added calculation of transfer matrices of layers
herck
17:39 Revision 983d221e: Manual - example - updates for particles (refractive index replaced by materia...
celine
17:33 Revision fe158076: setName for formfactors
pospelov
15:15 Revision 590eda24: Bug item339 (non initialized pdf's for 2DPara) corrected
pospelov
14:55 Revision d386f811: Merge branch 'manual_fit_ex_theory' into develop
celine
14:54 Revision 1666bf06: Manual - Example - Implementation of Gennady's comments (new figure for sample...
celine
14:01 Bug #339 (Sprint): crash on addInterferenceFunction() without any error message
pospelov
13:25 Bug #339 (Resolved): crash on addInterferenceFunction() without any error message
When trying to add a 2DParaCrystal interference function without setting a probability distribution to it, a crash oc... Anonymous
11:29 Bug #338 (Sprint): Strange warning in boost::python api generation
pospelov

26 Jul 2013

18:41 Refactoring #334 (Resolved): Replace Particle's index of refraction with material
pospelov
18:35 Bug #338 (Resolved): Strange warning in boost::python api generation
although everything semms to be working
/home/pospelov/development/git/BornAgain/Core/Samples/inc/Layer.h:65:18: w...
pospelov
18:32 Revision 46585050: IMaterial in IParticle
pospelov
16:00 Feature #329 (Resolved): Add new cmake build configuration to TeamCity
pospelov
15:45 Revision 53de8a00: Merge branch 'EasyBuild5'
Conflicts:
Doc/UserManual/Examples.tex
pospelov
15:41 Revision 9a0ad461: Updates in user manual: installation
pospelov
14:54 Revision 96bee2e4: Merge branch 'fit_python_ex' into develop
Conflicts:
Doc/UserManual/UserManual.pdf
celine
14:51 Revision fa6f6d29: Manual - updated version of lstcustom.sty
celine
14:09 Bug #336 (Resolved): Compile Error on Ubuntu 12.04
pospelov
14:09 Bug #336: Compile Error on Ubuntu 12.04
> The following tests FAILED:
> 12 - MesoCrystal1 (Failed)
> 24 - mesocrystal1.py (Failed)
Ok, thanks,
thes...
pospelov
13:53 Bug #336: Compile Error on Ubuntu 12.04
Thanks! Works now. 'make check' output:
93% tests passed, 2 tests failed out of 28
Total Test time (real) = 142.6...
Anonymous
13:37 Revision f63de005: Removed mesocrystal tests from CTest
pospelov

25 Jul 2013

00:23 Bug #336: Compile Error on Ubuntu 12.04

* We have significantly changed installation procedure, now it relies on CMake
* Could you please try
** _git...
pospelov
17:51 Bug #336 (Sprint): Compile Error on Ubuntu 12.04
pospelov
17:37 Bug #336 (Backlog): Compile Error on Ubuntu 12.04
pospelov
15:39 Bug #336 (Resolved): Compile Error on Ubuntu 12.04
When trying to compile the latest repository version I get an error. Any idea what the problem is?
LOG:
g++ -c -m...
Anonymous
00:18 Revision 2182089f: Merge branch 'release-0.8.1'
pospelov
00:16 Revision 12272a9d: Preparing new release
pospelov
23:45 Revision b8ee5238: cmake: bug in python interpreter/puthon library pair selection
pospelov
21:42 Feature #337 (Rejected): cmake: implement CPack generation of tgz archive
CPack is part of cmake to generate binary installers for the system where cmake is executed.
It can also be used for...
pospelov
17:51 Refactoring #334 (Sprint): Replace Particle's index of refraction with material
pospelov
17:34 Feature #317 (Resolved): Remove Decorator pattern from user interface
pospelov
17:27 Revision dc297cde: Merge branch 'LayerDecorator'
pospelov
17:27 Revision d591d06c: Mesocrystal test returned back to cTest
pospelov
17:15 Revision 5a0ee0ac: Update in pythonAPI, bug in cmake with unconsistent python interpreter .vs. py...
pospelov
16:54 Revision 21d35c49: PythonAPI is restored, python examples corrected, new unit LayerTest
pospelov
13:49 Revision 19f9f1b0: Remove of LayerDecorator
pospelov
13:48 Revision c0718c71: Performance measurements
pospelov
13:05 Revision 58c513f0: Performance measurements
pospelov

24 Jul 2013

13:38 Revision 1d8dd293: Merge branch 'fitting_ex_manual' into develop
Conflicts:
Doc/UserManual/UserManual.pdf
Doc/UserManual/UserManual.tex
celine
13:30 Revision 1fd44762: Manual - updated version of Python Example (sign of input beam angle and conve...
celine

23 Jul 2013

16:45 Documentation #309 (Resolved): Write how to install in manual and wiki
pospelov
16:43 Revision 7f6f2233: Merge branch 'EasyBuild4'
pospelov
16:42 Revision c9e4de68: Updates in user manual
pospelov
14:13 Revision 85d0d592: Updates in installation instruction
pospelov
12:52 Revision 4f8c1c07: Merge branch 'batchSystem2' into develop
herck
12:52 Revision 05555c5a: Added programmable way to indicate batch and thread information (not through P...
herck
11:26 Revision ba91dc4b: Update in install section of user manual
pospelov
09:49 Feature #335 (Archived): Check Python 3 compatibility
pospelov
09:48 Refactoring #334 (Backlog): Replace Particle's index of refraction with material
pospelov

22 Jul 2013

17:51 Feature #301 (Resolved): Implement batch mode for the Simulation (suggestion of Gunthard Benecke)
herck
17:47 Revision 3296331c: Merge branch 'batchMode' into develop
herck
17:47 Revision 33f742ec: Fixed bug ("batch" parameter was already defined)
herck
16:49 Revision c6cb04e9: Added batch information to ThreadInfo
herck
15:43 Testing #332 (Resolved): cmake build in Ubuntu and corresponding how to in the documentation
pospelov
13:08 Refactoring #334 (Resolved): Replace Particle's index of refraction with material
pospelov
09:10 Feature #333 (Rejected): PythonAPI: provide convertion of eigen matrix to numpy array
To support new beam polarization features from python.
So far only found this
* https://github.com/jorisv/Eigen3T...
pospelov

21 Jul 2013

17:35 Revision 9f175a23: PythonAPI is restored
pospelov
12:15 Revision c6b479fd: Merge branch 'EasyBuild4' into develop
Conflicts:
Tests/FunctionalTests/TestFit/TestFit01/TestFit01.cpp
pospelov
12:12 Revision 1469848f: qmake fix under Mac, cmake fix under mac
pospelov

19 Jul 2013

17:11 Feature #101 (Resolved): Move ROOT minimization into ThirdParty and so get rid from ROOT dependency
pospelov
17:11 Feature #101: Move ROOT minimization into ThirdParty and so get rid from ROOT dependency

Most important ROOT+GSL minimizers are included into Bo5rnAgain.
In principle, one can leave withoout ROOT now
pospelov
17:07 Revision d82fbe2b: Bug fix in cmake: allow undefined symbols in RootMinimizer library
pospelov
16:22 Feature #264 (Resolved): Change conventions (feedback from GISS Workshop)
herck
16:21 Revision 34ae18ce: Merge branch 'conventions' into develop
herck
16:11 Revision 047aeccf: Beam's alpha_i value can also be given as positive value now (internally it ne...
herck
16:11 Revision 6e27ecc8: new RootMinimizers library, multiple updates in cmake and qmake, no ROOT depen...
pospelov
15:38 Revision 7988c4b1: Changed convention for passing two doubles to define refractive indices: now n...
herck
13:46 Feature #324 (Resolved): Add magnetic materials
herck
13:33 Revision 80e8cfc4: Merge branch 'magneticMaterials' into develop
herck
13:32 Revision b33fc841: Added HomogeneousMagneticMaterial class to represent magnetic materials for po...
herck

18 Jul 2013

17:13 Testing #332 (Resolved): cmake build in Ubuntu and corresponding how to in the documentation
pospelov
17:13 Documentation #331 (Resolved): Write simple fitting example and corresponding section in the docu...
pospelov
17:11 Feature #264 (Sprint): Change conventions (feedback from GISS Workshop)
pospelov
17:11 Feature #317 (Sprint): Remove Decorator pattern from user interface
pospelov
17:10 Feature #329 (Sprint): Add new cmake build configuration to TeamCity
pospelov
17:04 Revision 0d54acff: Merge branch 'EasyBuild4'
pospelov
17:02 Revision 6276ca72: Updates in user manual
pospelov
16:55 Revision cf203c53: qmake: FunctionalTests are included in the project
pospelov
16:17 Revision 9b38ac09: Loose criteria for 2e-10 instead of 1e-10 for all functional tests
pospelov
15:28 Revision 170a86d9: Merge branch 'origin/develop'
Conflicts:
Doc/UserManual/UserManual.pdf
Doc/UserManual/UserManual.tex
Doc/UserManual/lstcustom.sty
pospelov
15:19 Revision 8ebf492f: Merge branch 'EasyBuild3'
pospelov
14:45 Revision 5f648c2e: Merge branch 'manual_examples' into develop
celine
14:44 Revision d4a3f8c6: Example 01 in Python (new figure for sample)
celine
14:43 Revision 5f2d4997: UserManual: instructions for OpenSUSE
pospelov
14:33 Revision 32a82b92: cmake: bug fix in copying libraries into lib directory
pospelov
09:47 Revision 684113c9: qmake build from separate directory, fixes in cmake search for installed software
pospelov
09:09 Feature #101 (Sprint): Move ROOT minimization into ThirdParty and so get rid from ROOT dependency
pospelov

17 Jul 2013

17:45 Revision fc357bbb: OpenSuse: defence against missed numpy/arrayobject.h
pospelov
17:25 Feature #323 (Resolved): Add polarization state to Beam
herck
17:24 Revision 91d113ce: Merge branch 'polarizedBeam' into develop
herck
17:24 Revision 3bd0c195: Added polarization density matrix to Beam and fixed performance test
herck
11:20 Revision cd9f9be8: Small fix for R,T calculation when kz=0
herck
11:19 Documentation #330 (In Progress): Core: beam propagation: take care of kz=0 case appropriately
Right now, when kz is exactly zero inside a layer, a possible linear amplitude profile is not taken care of.
Instead...
herck
10:45 Feature #322 (Resolved): Move specular calculation to the SpecularMatrix class (for scalar)
herck

16 Jul 2013

17:59 Revision ce16af44: Merge branch 'moveToMatrixFormalism' into develop
herck
17:56 Revision d124bbd8: Implemented limiting cases for specular matrix calculation
herck
12:14 Revision 01d594da: User manual: quick start section
pospelov
10:37 Revision a5758490: Tweaked for Xcode compilation and did some cleanup
herck

15 Jul 2013

10:55 Revision d301ef2d: Merge branch 'tilted_particles' into develop
Conflicts:
Core/Samples/inc/Layer.h
Core/Samples/inc/LayerDecorator.h
Core/Samples/src/Layer.cpp
Doc/UserManual/U...
celine
10:51 Revision 9124c031: Put matrix formalism as default
herck
10:44 Revision 4bb0fc29: Manual - example 01 in progress
celine

13 Jul 2013

23:44 Feature #329 (Resolved): Add new cmake build configuration to TeamCity
Include Functional tests in post build step:
* add cmake check results to CDash board
* or, add cmake check results...
pospelov
23:42 Feature #299 (Resolved): Ease installation for users

* New cmake build system
* New cmake/ctest based functional test system
* No libMathMore anymore
* GSL can be do...
pospelov
23:38 Revision a88a532c: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
pospelov
23:33 Revision 85ad68b4: Bug in cmake/ctest: python functional tests were using from wrong build, new P...
pospelov
22:27 Revision e77b7482: Cmake: setups, flags for windows, linux, mac
pospelov
19:50 Revision 6082ce66: TestCore functional tests are independent now from working directory
pospelov

12 Jul 2013

14:19 Revision a2379263: cmake tuning: Apps issue with gtest
pospelov
13:36 Revision d47a2c65: cmake tuning: Juelich issue
pospelov
13:33 Revision 7c07d3d2: Merge branch 'polarization' into develop
herck
13:32 Revision 4a7408d5: Completed implementation of roughness for matrix formalism and ran performance...
herck
13:32 Revision 1261418d: Refactored roughness matrix calculation
herck
13:32 Revision 47979732: Aesthetics
herck
13:32 Revision 91a3c377: Refactored OpticalFresnel and removed inconsistency there (t should be defined...
herck
13:20 Feature #328 (Resolved): Develop roughness calculation for matrix formalism
herck
13:20 Revision 03eccfa8: Python ON in cmake
pospelov
13:14 Revision 8c1a8782: GSL can be automatically downloaded and compiled when -DBUILTIN_GSL=ON
pospelov
11:28 Revision c23395ce: installation directory for cmake
pospelov
10:20 Revision 7db374ab: Buildin version of eigen
pospelov

11 Jul 2013

18:57 Revision 3e9cc9eb: Mesocrystal test is faster now, check for BOOST version (<1.48 gives buggy Pyt...
pospelov
16:43 Revision 2a856ad0: Remaining's from Core/Fitting are moved to Fit library
pospelov
15:53 Revision f745b16d: New library ThirdParty/RootMathMore
pospelov
14:54 Revision 986656a9: UnitTests now executed automatically during cmake build
pospelov
13:48 Revision 2276d461: TestPyCore and TestPyFit have been added to cmake/ctest
pospelov
11:31 Revision 34b20909: TestCore and TestFit functional tests are executed now through crest machinery
pospelov

10 Jul 2013

16:48 Revision 770ffe32: App and guest compiled with cake
pospelov
13:48 Revision 642902a1: libBornAgainFit is compiled with cmake
pospelov
13:24 Revision 446aa0eb: Necessary code from MathMore is moved into Fit/Factory
pospelov

09 Jul 2013

17:14 Revision dc2af02e: libBornAgainCore is compiled with cmake
pospelov
14:58 Feature #328 (Resolved): Develop roughness calculation for matrix formalism
herck
10:58 Revision 87e0d8bf: Minor fixes
pospelov
10:57 Testing #316 (Resolved): Move all IsGISAXS geometries to Core/StandardSample directory
pospelov
10:57 Testing #316: Move all IsGISAXS geometries to Core/StandardSample directory
Partly moved to StandardSamples pospelov
10:56 Documentation #307 (Resolved): Populate examples directory with several well commented python scr...
pospelov
10:04 Revision 6e6c4cd6: isgisaxs09 example
pospelov
09:33 Revision cdafee93: isgisaxs06 example
pospelov

08 Jul 2013

16:30 Revision b6b95df8: isgisaxs03 example
pospelov
15:51 Revision 93007528: isgiasxs02 example
pospelov
15:16 Revision 569c628a: isgisaxs1 and isgisaxs4 examples
pospelov
12:16 Feature #327 (Resolved): Add DWBA for magnetic particles
herck
12:13 Feature #326 (Resolved): Use magnetic calculation when a magnetic material is present
Otherwise, stick to the faster algorithm for scalar interactions herck
12:12 Feature #325 (Resolved): Develop MatrixSpecular for magnetic materials
herck
12:09 Feature #324 (Resolved): Add magnetic materials
herck
12:09 Feature #323 (Resolved): Add polarization state to Beam
herck
12:08 Feature #322 (Resolved): Move specular calculation to the SpecularMatrix class (for scalar)
herck
11:17 Revision 269f1444: Moving BornAgain reference data in ReferenceData
pospelov
10:15 Revision 56f65bc5: Moving IsGISAXS examples in Tests directory (forgot to switch branch)
pospelov
09:51 Documentation #311 (Resolved): Adapt local python script for plotting data
herck

05 Jul 2013

15:16 Revision 4a2195ec: Merge branch 'PyExamples' into develop
pospelov
15:14 Revision 80c46ced: Fix to compile under mint linux
pospelov
14:58 Feature #319 (Rejected): Core: Provide lamellar form factor for soft matter
herck
14:53 Bug #249 (Resolved): FunctionalTests: fitting from python works two times faster than fitting fro...
pospelov
14:52 Bug #249: FunctionalTests: fitting from python works two times faster than fitting from C++
Can't reproduce the bug. So it can come back.
Possible reason - different number of threads, or difference in defaul...
pospelov
12:05 Bug #249 (Sprint): FunctionalTests: fitting from python works two times faster than fitting from C++
pospelov
14:50 Feature #318 (Archived): Implement beam divergence and wavelength distribution
pospelov
14:18 Feature #317 (Resolved): Remove Decorator pattern from user interface
The user of our library should not be exposed to implementation details, like the decorator pattern.
For example, in...
herck
13:26 Revision 4b03d059: Added python script for plotting ascii file with two dimensional data array
herck
11:44 Revision 401534bd: PythonAIP corrected
pospelov
11:08 Testing #316 (Resolved): Move all IsGISAXS geometries to Core/StandardSample directory
pospelov
10:45 Revision 52b7c831: Removed version numbers in generated libraries for *nix systems
herck
 

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