Activity

From 02 Oct 2013 to 31 Oct 2013

31 Oct 2013

15:08 Bug #468 (Archived): Make use of python interpreter to guess libpython location
CMake can be puzzled if more then one python is present on the system.
To avoid mixing of different version of inter...
pospelov
15:04 Feature #431 (Sprint): Build: provide thisbornagain.sh to set system PATHs to the installation di...
pospelov

30 Oct 2013

17:40 Bug #466 (Rejected): Our CMake gets confused when there are boost 1.46 and 1.48 present on the sy...
It finds boost 1.46 and then complains, that version is too old.
Was nnoticed on Alice's ubuntu.
pospelov

29 Oct 2013

16:44 Documentation #448 (Sprint): Examples: prepare FitCylindersAndPrism_detailed example
pospelov
16:42 Feature #465 (Archived): Organize BornAgain mail list with subscription
pospelov
16:41 Feature #464 (Rejected): Investigate running TeamCity build agent on Windows server
pospelov
16:39 Documentation #449 (Sprint): Review manual's simulation python example section to conform changes...
pospelov
16:23 Bug #447 (Sprint): Our minimum required cmake version 2.8.0 doesn't contain PARSE_MACRO
pospelov
16:18 Bug #463 (Archived): Provide compilation under Jülich CentOS 5.10
Josef Heinen reported build failure on Jülich CentOS due to static version of libpython.a (thread issue) pospelov
16:16 Bug #462 (Archived): Provide compilation on Jülich MacOS server
Josef Heinen observed build failure on Jülich MacOS server.
CMake gets tangled between different versions of Python ...
pospelov
16:13 Bug #461 (Archived): Provide compilation on latest MacOS Maverick
Josef Heinen found out build failure on latest MacOS Maverick.
Apparently new MacOS clang is too strict with our code.
pospelov
11:38 Support #460 (Archived): Create git repository for user related info
* should be protected
* kind of database of users and they requests
* among other things, will contain scripts with...
pospelov
11:34 Documentation #455 (Sprint): Add demos into Examples/python section
pospelov
11:32 Documentation #441 (Resolved): Prepare talk for Koordinierungstreffen
pospelov
11:32 Feature #444 (Resolved): Prepare talk for ILL
herck
11:25 Documentation #459 (Archived): Review installation section
* Describe installation on Windows if the user already has Python installed
* Recommend PyCharm
* Explain thisborna...
pospelov

26 Oct 2013

18:15 Documentation #456 (Resolved): Prepare talk "Data Analysis in HEP" for ILL
pospelov
18:15 Documentation #458 (Resolved): Prepare talk about Python bindings for ILL
pospelov

25 Oct 2013

14:59 Revision f7e649cb: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
pospelov
14:59 Revision e66d9a7f: Picture with number of lines of code
pospelov
14:58 Revision 58c72b97: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
herck
14:58 Revision 1bd36ac0: Added demos
herck

21 Oct 2013

10:51 Documentation #458 (Archived): Prepare talk about Python bindings for ILL
pospelov
10:13 Testing #457 (Resolved): Implement unit tests for form factors
celine

19 Oct 2013

11:17 Documentation #456 (Archived): Prepare talk "Data Analysis in HEP" for ILL
pospelov

18 Oct 2013

11:15 Revision 839502ca: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
pospelov
11:15 Revision 8466c669: Another qmake fix
pospelov
11:03 Revision 2f0daf30: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
herck
11:02 Revision ff13037e: Added python demos to git
herck
10:59 Revision f33c1b6e: Fix for qmake
pospelov
10:05 Revision ae0fe894: Bug fix in fitting introduced with the last refactoring fixed.
pospelov
10:03 Documentation #455 (Archived): Add demos into Examples/python section
Those demos which Walter has prepared for Hamburg/ILL.
With short README.
pospelov
09:39 Feature #454 (Archived): Change behavior of setParameterValue
If there is '*' in the parameter name, then setMatchedParametersValue should be used instead of setParameterValue
Up...
pospelov
09:19 Revision b167db30: Merge branch 'FitManual'
Conflicts:
CMakeLists.txt
Core/PythonAPI/src/FormFactorGauss.pypp.cpp
pospelov
09:13 Revision 71731a1e: Manual: gentle introduction to the data fitting
pospelov

17 Oct 2013

14:43 Revision 3090132c: New TestToyFitting to illustrate the manual
pospelov
11:34 Feature #450 (Resolved): Provide python function to retrieve polarized output data
herck
10:06 Feature #450 (Archived): Provide python function to retrieve polarized output data
herck
11:34 Revision 097bd31f: Merge branch 'python_pol_outputdata' into develop
herck
11:34 Revision ed71125c: Added global function to retrieve polarized output data in python
herck
09:42 Documentation #449 (Archived): Review manual's simulation python example section to conform chang...
pospelov
09:38 Refactoring #443 (Resolved): Refactor IMinimizer for better control of minimizer option
pospelov

16 Oct 2013

17:59 Revision 50e5e38f: Fitting example explained + lots of changes in fitting PythonAPI
pospelov
17:51 Revision 3e41c917: Reset python & app building to defaults
herck
17:47 Revision 5356e3bd: Merge branch 'mc_ff2' into develop
herck
17:43 Revision 38c10873: Found Gaussian FormFactor problem: height was much bigger than layer thickness...
herck
17:42 Documentation #448 (Archived): Examples: prepare FitCylindersAndPrism_detailed example
It has to contain access to Simulated data with optimal parameters from the fit and simple matplotlib visualization
...
pospelov
13:49 Revision 969f7742: Use Gauss form factor for mesocrystal simulation
herck
13:49 Revision b903250e: Add getVolume() to FormFactorGauss
herck
13:49 Revision 6061c84a: Changed lattice calculations
herck
13:49 Revision 85c0495c: Refactored FormFactorGauss
herck
13:49 Revision c601a047: Updated Xcode project
herck
10:58 Revision c30bb52c: UserManual section: associating model and reference in the fit
pospelov
10:38 Revision 0c260094: Put back hardcoded BAVersion.h file to fix quake build
herck

15 Oct 2013

17:42 Revision e8c823e1: Minimizer setting parts in User manual and corresponding refactoring (Minimize...
pospelov
15:51 Bug #447 (Archived): Our minimum required cmake version 2.8.0 doesn't contain PARSE_MACRO
Add another minimum required version 2.8.10(?) or add own version of PARSE_MACRO pospelov
13:31 Revision bf82b22e: Adapt release script
herck
13:12 Refactoring #236: multi-line comment style
In 'modern' IDE's, the symmetric version can also be collapsed :) herck
12:59 Refactoring #236 (Backlog): multi-line comment style
libBornAgainFit should be equipped with correct header too
pospelov
11:44 Revision 3b3bd5ba: New method printSampleTree for python users comfort
pospelov
11:11 Feature #446 (Archived): Repair broken Genetic minimizer after we get rid from ROOT dependency
pospelov
11:06 Revision ba8aab07: Merge branch 'iss417' into develop
Conflicts:
CMakeLists.txt
herck
11:02 Testing #445 (Archived): Implement BornAgainFit unit test infrastructure
pospelov
11:01 Revision c6f0846c: IParameterized::setParameterValue behavior changed to the global pool
pospelov
10:06 Feature #444 (Archived): Prepare talk for ILL
herck
09:14 Refactoring #443 (Archived): Refactor IMinimizer for better control of minimizer option
pospelov

14 Oct 2013

17:07 Revision 612408ff: Some other minor changes to the release script.
ganeva
16:29 Documentation #439 (Resolved): Explain sample parameters paradigm in simulation examples section
pospelov
16:28 Revision 2958ce78: Sample parameter pool is explained
pospelov
16:23 Revision df10fcfb: Some small corrections to the release script.
ganeva
15:41 Revision dc0c1b1a: Added menu to the release script.
ganeva

11 Oct 2013

18:44 Revision 200a314f: Manual: fitting implementation details in BornAgain
pospelov
18:03 Documentation #442 (Rejected): Review SoftwareDesignOverview section

Walter?
pospelov
16:22 Documentation #441 (Archived): Prepare talk for Koordinierungstreffen
pospelov
15:58 Documentation #440 (Resolved): Create svg plot representing minimization flow
pospelov
13:47 Documentation #440 (Archived): Create svg plot representing minimization flow
pospelov
15:58 Feature #438 (Resolved): Adjust existing python examples to conform PEP8 style
pospelov
09:36 Feature #438 (Archived): Adjust existing python examples to conform PEP8 style
pospelov
15:56 Revision 03f11a41: New plot with minimization workflow
pospelov
13:48 Refactoring #436 (Sprint): Refactor ISample, IParameterized and ParameterPool for better access t...
pospelov
13:47 Feature #437 (Sprint): Provide OutputData with ExportToNumpy function for PythonAPI
pospelov
12:34 Documentation #439 (Archived): Explain sample parameters paradigm in simulation examples section
pospelov
11:24 Revision 6d300e37: Added graphics in SampleParametersIntro.py, all other python examples modified...
pospelov

10 Oct 2013

16:06 Feature #437 (Archived): Provide OutputData with ExportToNumpy function for PythonAPI
This has to be discussed. We need some general approach to access OutputData in Python,
including the cases when Out...
pospelov
15:59 Feature #287 (Backlog): IntensityData campaign
pospelov
15:57 Refactoring #436 (Archived): Refactor ISample, IParameterized and ParameterPool for better access...
Refactor ISample, IParameterized and ParameterPool for better access to global ISample's parameter pool and natural i... pospelov
15:54 Feature #34: Implement different types of detector scans

This must be the part of some other activity, not OutputData
pospelov
14:59 Feature #434 (Rejected): User Requests campaign
pospelov
14:33 Feature #434 (Rejected): User Requests campaign
This is the issue to group different user requests pospelov
14:39 Feature #435 (Archived): Request: provide JFM with the python script simulating the sample_jfm1
sample_jfm1 means two homogeneous layers with spheres 50nm at hexagonal lattice.
There will be probably other reques...
pospelov
09:43 Revision 098c64d0: New example SampleParametersIntro
pospelov

09 Oct 2013

23:05 Documentation #432: Examples: prepare example with correlated roughness interface
Also provide one example with just a single rough interface herck

08 Oct 2013

23:38 Documentation #433 (Rejected): Write paragraph with performance comparison IsGISAXS vs FitGISAXS ...
pospelov
17:24 Documentation #432 (Archived): Examples: prepare example with correlated roughness interface
pospelov
17:09 Feature #431 (Archived): Build: provide thisbornagain.sh to set system PATHs to the installation ...
pospelov
15:45 Revision d705ffb9: Restructured example directory, setMatchedParameterValue added to ISample
pospelov
10:01 Feature #430 (Archived): Examples: prepare example with core shell nanoparticles
This should be taken from
./Tests/FunctionalTests/TestPyCore/isgisaxs11.py
During GISAXS2013 workshop there were ...
pospelov
09:20 Documentation #423 (Resolved): Prepare demo for GISASXS 2013
herck
07:19 Revision d0971a8b: GUI in Unix is repaired (was broken after Windows build)
pospelov

07 Oct 2013

16:46 Documentation #429 (Archived): Write Appendix which lists all implemented examples from Examples ...
With plots which are produced by every example. pospelov
16:42 Envelope task #428 (Archived): == IsGISAXS coverage ==
This is the main issue for all sub-tasks related to the still missed IsGISAXS functionality.
The main goal of activi...
pospelov
16:34 Documentation #427 (Rejected): User Examples campaign
This is a master issue for all usage examples to be placed in Examples section.
These examples should clearly demon...
pospelov
15:41 Revision 89483a09: New edition of the release deployment script.
ganeva

06 Oct 2013

11:09 Documentation #426 (Archived): Examples: prepare C++ standalone example in Examples section
We need one standalone C++ example in Examples/cpp/ex001_CylindersAndPrism which will reproduce python example from
...
pospelov
10:38 Testing #412 (Backlog): Unit and functional tests campaign
pospelov
10:36 Feature #420 (Backlog): Refactor BornAgainCPack by removing generator's setting in separate files
pospelov
10:36 Feature #425 (Backlog): Write deployment script for Windows
pospelov
10:34 Feature #425 (Rejected): Write deployment script for Windows
* Script should automatize generation of installer package
* Discuss with our IT the possibility to organize build a...
pospelov
10:36 Feature #418 (Backlog): === Configuration & Build ===
pospelov

02 Oct 2013

14:51 Envelope task #424 (Archived): === PythonAPI ===
There are several problems to address
* Provide argument list in functions and constructors with readable helper i...
pospelov
14:35 Testing #414 (Sprint): Implement functional test: polarized DWBA with zero magnetic field
pospelov
14:35 Testing #421 (Sprint): Repair Performance test
pospelov
14:19 Testing #413 (Sprint): Repair MesoCrystal functional test
pospelov
14:00 Documentation #404 (Resolved): Prepare poster for GISAXS2013 Workshop in Hamburg
pospelov
14:00 Feature #396 (Resolved): Create deb package
pospelov
13:58 Feature #396 (Sprint): Create deb package
pospelov
13:59 Feature #417 (Resolved): implement automatic propagation of BornAgain version number into cmake
pospelov
13:58 Feature #417 (Sprint): implement automatic propagation of BornAgain version number into cmake
pospelov
13:59 Feature #419 (Sprint): Write deployment script which will automatize the release
pospelov
13:46 Revision bdcc861e: Command line version of python script for lines of code cl_lines_of_code.py is...
ganeva
 

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