Activity

From 09 Dec 2013 to 07 Jan 2014

07 Jan 2014

17:02 Revision 338373bf: Merge branch 'ripple2analytical' into develop
ganeva
16:30 Revision 22a85fd0: Implemented analytical expresion for the Ripple2 formfactor.
ganeva
15:20 Revision e721993d: Merge branch 'origin/develop'
pospelov
14:54 Feature #553: Provide interface to perform off-specular scattering simulations
Since the current GISAS calculations do not include the specular part of the reflected wave yet, this information wil... herck
14:51 Feature #553 (Archived): Provide interface to perform off-specular scattering simulations
This interface has been asked for by different people (Glavic, Mattauch, ...)
The idea is to be able to parametrize ...
herck
14:49 Revision fdb9ff5c: Merge branch 'TestFit'
pospelov
14:49 Revision f2e2ce47: Removed BAConfigure.h from tracking
pospelov
14:37 Testing #445 (Resolved): Implement BornAgainFit unit test infrastructure
Anonymous
14:37 Testing #551 (Resolved): Implement tests for AttLimits, FitParameter, FitParameterLinked
Anonymous
14:32 Revision f4f551eb: 1. BornAgainFit unit test infrastructure
2. Tests for AttLimits, FitParameter, FitParameterLinked mahadi
13:59 Revision d12425d2: Merge branch 'ripple2example' into develop
ganeva
13:57 Revision 2e9a7150: Example for the triangular ripple.
ganeva

03 Jan 2014

15:59 Bug #461 (Resolved): Provide compilation on latest MacOS Maverick
pospelov
15:26 Revision 53608fef: Commented debug output
pospelov
13:58 Revision ab2aade4: Debug printing to resolve isgisaxs08 test failure
pospelov
11:16 Revision c51c2b58: gtest-1.7.0 is used now to provide compilation under Maverick
pospelov
10:44 Revision 4d0da079: Compilation fixes for Maverick
pospelov

02 Jan 2014

14:38 Testing #551 (Sprint): Implement tests for AttLimits, FitParameter, FitParameterLinked
Anonymous
14:38 Testing #551 (Archived): Implement tests for AttLimits, FitParameter, FitParameterLinked
Anonymous
10:33 Documentation #549 (Sprint): Doxygen API: review form factors description
pospelov
10:20 Documentation #549 (Archived): Doxygen API: review form factors description
* Possibly add plots with geometrical shapes into corresponding form factor Doxygen API page
pospelov
10:21 Documentation #429 (Backlog): Write Appendix which lists all implemented examples from Examples s...

* and also add examples description into corresponding Doxygen API page
pospelov
09:57 Testing #445 (Sprint): Implement BornAgainFit unit test infrastructure
pospelov
09:57 Documentation #546 (Sprint): Complete Appendix with all form factors listed
pospelov
09:56 Documentation #546 (Backlog): Complete Appendix with all form factors listed
pospelov
09:51 Bug #545 (Sprint): PolarizedDWBAZeroMag functional test fails under windows
pospelov
09:49 Bug #461 (Sprint): Provide compilation on latest MacOS Maverick
pospelov

20 Dec 2013

13:43 Documentation #546 (Archived): Complete Appendix with all form factors listed
pospelov
13:08 Bug #545 (Archived): PolarizedDWBAZeroMag functional test fails under windows
pospelov
13:07 Feature #544 (Archived): Provide example with user's form factor extension from python
* FormFactor of some simple shape has to be created in python and passed to C++ simulation
* provide corresponding...
pospelov
13:05 Testing #537 (Resolved): Create MultiLayer unit test
pospelov
11:24 Testing #537 (Sprint): Create MultiLayer unit test
pospelov
13:05 Revision 7f980974: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
herck
13:05 Feature #543 (Archived): Review release script
We have release procedure, described in
http://apps.jcns.fz-juelich.de/redmine/projects/bornagain/wiki/Making_releas...
pospelov
13:05 Revision aef1642e: Aesthetics + eclipse project file update
herck
12:56 Revision 9090db1c: Merge branch 'TestMultiLayer' into develop
pospelov
12:55 Revision 80a43cdf: Defence against negative Layer thickness in MultiLayer, clean-up in MultiLayer...
pospelov
11:39 Feature #542 (Rejected): Windows installer: check existence of BornAgain and uninstall it if exists
Currently this feature works only partly and looks more like a bug: installer will uninstall existing version of Born... pospelov
11:15 Testing #524 (Archived): Produce a functional test for the layer with roughness
pospelov
11:15 Feature #527 (Archived): Implement the ripple 2 (triangular) formfactor
pospelov
11:15 Feature #540 (Archived): Provide consistent propagation and composition of transformations
pospelov
11:15 Bug #512 (Archived): Particles' magnetic materials are not transformed
pospelov
11:15 Bug #508 (Archived): Pacman assymetry in peaks of meso crystal simulation
pospelov
11:15 Bug #509 (Archived): OutputData<T>.setAllTo(value) crashes (nullpointer) after clear()
pospelov
11:15 Support #511 (Archived): Provide example with 2 parameter fit of spheres in a hex lattice
pospelov
11:15 Bug #516 (Archived): Simulation of mesocrystal differs when doing 4 vs 8 threads
pospelov
11:15 Feature #483 (Archived): Implement/review Anisotropic pyramid formfactor
pospelov
11:15 Feature #435 (Archived): Request: provide JFM with the python script simulating the sample_jfm1
pospelov
11:15 Feature #494 (Archived): Implement all IsGISAXS distribution functions
pospelov
11:15 Bug #499 (Archived): Simulated formfactors sphere (for H=2R) and fullsphere are squeezed
pospelov
11:15 Bug #505 (Archived): Investigate and possibly fix transformations for polarized mesocrystals
pospelov
11:15 Feature #477 (Archived): Implement/review Cone formfactor
pospelov
11:15 Feature #478 (Archived): Implement/review Tethraedron formfactor
pospelov
11:15 Feature #479 (Archived): Implement/review Prism6 formfactor
pospelov
11:15 Feature #480 (Archived): Implement/review Cone6 formfactor
pospelov
11:15 Feature #481 (Archived): Implement/review Cybooctaedron formfactor
pospelov
11:15 Refactoring #416 (Archived): CHeck and fix //TODO's and //FIXME's
pospelov
11:15 Documentation #489 (Archived): Python docstrings
pospelov
11:15 Documentation #426 (Archived): Examples: prepare C++ standalone example in Examples section
pospelov
11:15 Feature #430 (Archived): Examples: prepare example with core shell nanoparticles
pospelov
11:15 Documentation #432 (Archived): Examples: prepare example with correlated roughness interface
pospelov
11:15 Refactoring #522 (Archived): Clean up in App and FunctionalTests
pospelov
11:15 Testing #529 (Archived): Create TRange unit test
pospelov
11:15 Testing #530 (Archived): Create AxisBin unit test
pospelov
11:15 Testing #535 (Archived): Modify Particle unit test
pospelov
11:15 Testing #536 (Archived): Create FTDistributions unit test
pospelov
11:15 Testing #414 (Archived): Implement functional test: polarized DWBA with zero magnetic field
pospelov
11:15 Feature #506 (Archived): Refactor all tests to use new SimulationRegistry
pospelov
11:15 Refactoring #507 (Archived): Wrap SampleBuilder in the shared pointer
pospelov
11:15 Documentation #471 (Archived): Write down formalism for polarized DWBA on embedded particles
pospelov
11:15 Documentation #475 (Archived): Create prototype of latex (pdf) page representing form factor
pospelov
11:15 Documentation #501 (Archived): API reference for manual
pospelov
11:15 Feature #410 (Archived): Review and improve on mesocrystal form factors
pospelov
11:15 Bug #469 (Archived): Review form factor calculation for big particle dimensions
pospelov
11:15 Testing #413 (Archived): Repair MesoCrystal functional test
pospelov
11:15 Refactoring #232 (Archived): rename "min" and "max" in TRange, ...
pospelov
11:15 Testing #127 (Archived): Add LLData Unit tests
pospelov
11:15 Feature #288 (Archived): Provide correct implementation of tilted cylinder (and cone) formfactor ...
pospelov
11:15 Refactoring #302 (Archived): Return global static constants in the namespace back
pospelov
11:15 Refactoring #303 (Archived): Drop shared_ptr usage for BasicVector3D
pospelov
11:15 Refactoring #436 (Archived): Refactor ISample, IParameterized and ParameterPool for better access...
pospelov
11:15 Feature #454 (Archived): Change behavior of setParameterValue
pospelov
10:32 Revision bae7fca3: Merge
pospelov
10:32 Revision 87d209b5: Merge
pospelov
10:32 Revision 6e3f98ac: Release 0.9.3
pospelov
10:17 Revision 2516aedc: Fix in release script
pospelov

19 Dec 2013

18:04 Revision 7a02fb53: Added MultiLayer Unit Test
mahadi
16:39 Revision 0ff61006: User manual fix.
pospelov
16:13 Revision d9dc73f8: Ready to release
pospelov
16:06 Feature #405 (Rejected): Move filepath definitions to one single class/namespace
This was done already by introducing FileSystem.h and BAConfigure.h pospelov
15:27 Revision dd923344: Attempt (failed) to cure bug with PolarizedDWBAZeroMagField under windows.
pospelov
14:27 Revision 86081f82: Removed include (was the problem under Debian)
pospelov
14:17 Revision 355101cf: Corrected Include of WinDllMacros.h in linux
pospelov
14:13 Revision 8064d009: Automatic include of WinDllMacros.h in all files on Mac and linux
pospelov
13:39 Revision 9a727f28: Winbuild: more exports to the dll, WinDllMacros now automatically included fro...
pospelov
11:46 Revision b4bda7e3: Fixed minor warnings from PVS studio, attempt under Windows to resolve unreso...
pospelov
11:21 Revision b79818b2: Winbuild: few dllexports via BA_CORE_API
pospelov
09:29 Revision e14d6d4e: PythonAPI regenerated, IComposite iterators removed from Python API due to Win...
pospelov
09:13 Revision 704033f6: Updates in README files
pospelov

18 Dec 2013

18:21 Revision 9d34c3ba: CMake fix for python search in Windows
pospelov
17:47 Feature #79 (Resolved): Framework general: measure Eigen library performance in the view of gsl_m...

I accept this issue since we converged on Eigen already. Also Walter has implemented recently Eigen based transfo...
pospelov
17:45 Documentation #200 (Rejected): Doxygen comments for all classes

In the frame of the last doxygen UserAPI activity I have placed comments to all files and all classes (@class). But...
pospelov
16:44 Feature #464 (Rejected): Investigate running TeamCity build agent on Windows server

This has to wait until Nicolas Arend will start his new build server.
Hopefully, we will be able to use that ser...
pospelov
16:40 Revision 21441387: New version number
pospelov
16:30 Documentation #369 (Backlog): UserManual campaign
pospelov
16:30 Documentation #501 (Resolved): API reference for manual

* Rearranged doxygen page and lots of group comments in the code. The idea is to have UserAPI classes separated f...
pospelov
16:29 Feature #540 (Resolved): Provide consistent propagation and composition of transformations
herck
09:45 Feature #540 (Archived): Provide consistent propagation and composition of transformations
This issue is related to Support item 472. herck
16:25 Revision fc5974f8: Doxygen: comments in geometry
pospelov
16:19 Revision cba23daa: Merge branch 'UserAPI2'
Conflicts:
Core/Core.pro
Core/Geometry/src/Transform3D.cpp
Core/python_module.pri
Fit/python_module.pri
pospelov
16:15 Revision 5499745d: New doxygen docs switched on, Doxyfile.in is introduced for automatic propagat...
pospelov
16:04 Revision ef9c756c: Doxygen: more group comments
pospelov
15:34 Revision 9570a91c: Fixed incompatible interfaces after merge
herck
15:20 Revision 7e402c98: Merge branch 'transformations' into develop
herck
13:25 Revision 2bc7232c: Cache inverse of transformations and add interface for applying the inverse to...
herck
13:07 Revision 81831b9e: Propagate transformations from MesoCrystal to its member objects; fixed some bugs
herck
11:21 Revision 71c6c4f7: Fixed sign in the qy*d term for the ripple2 formfactor.
ganeva
10:36 Revision 69c7d4cf: Propagate transformations in LatticeBasis and removed createTransformedLattice...
herck
10:23 Revision a13f7688: Merge branch 'FFSpheroid1' into develop
celine
10:22 Revision 3cdafd61: Correction of the expression of Spheroid’s form factor.
Addition of missing IsGisxas files (*.ima) celine
07:56 Refactoring #538 (Resolved): Implementation of a consistent order of variables for all form factors
For all shapes, we should have something like Formfactor(dimension_x, dimension_y, dimension_z...)
For example, at...
celine

17 Dec 2013

18:01 Revision 95d1494f: Doxygen: further group comments in Tools
pospelov
17:59 Testing #537 (Archived): Create MultiLayer unit test
Anonymous
17:56 Testing #536 (Resolved): Create FTDistributions unit test
Anonymous
17:56 Testing #536 (Sprint): Create FTDistributions unit test
Anonymous
13:42 Testing #536 (Archived): Create FTDistributions unit test
Anonymous
17:44 Revision c58ee6f8: Doxygen: more grouping comments in StandardSamples and FormFactors
pospelov
17:42 Revision 12b8a759: added setParameter test
mahadi
17:37 Revision 077caf68: Propagate transformation of ParticleCoreShell to relative position
herck
17:25 Revision 718398b5: Propagation of transformations in ParticleCoreShell
herck
17:06 Revision 8dbc8841: Doxygen: comments in Algorithms and Samples
pospelov
17:06 Revision 2da123b6: FTDistributions unit test
mahadi
16:35 Revision 164909c0: Adapted python tests to new transformation interface
herck
16:12 Revision 2606aabe: Restored general rotational transformations for 3d vectors (Transform3D); remo...
herck
14:10 Revision 833c957a: Get rid from qmake *.pro and *.pri machinery
pospelov
13:52 Testing #535 (Resolved): Modify Particle unit test
Anonymous
13:52 Testing #535 (Sprint): Modify Particle unit test
Anonymous
13:41 Testing #535 (Archived): Modify Particle unit test
Anonymous
13:03 Revision ddddf112: Merge branch 'origin/TestParticle'
mahadi
12:52 Revision 9f0115b7: Exteneded particle test with different constructors, Transform, set params.
mahadi
11:29 Revision 45e92747: Doxygen: more comments in files, new directory FitKernel instead of Factory
pospelov
11:09 Revision 6d6bb849: Doxygen: commenting files
pospelov

16 Dec 2013

18:08 Revision 780deb78: Merge UserAPI
pospelov
18:07 Revision 43416d4f: Merge branch 'UserAPI'
Conflicts:
App/src/IsGISAXSTools.cpp
Core/Algorithms/src/Simulation.cpp
pospelov
17:57 Revision 4093122a: BA and AppVersion namespaces are now BornAgain namespace
pospelov
17:21 Revision 66084a0f: Doxygen: get rid from question marks in comments
pospelov
17:16 Refactoring #416 (Resolved): CHeck and fix //TODO's and //FIXME's
Leftover todo's and fixme's:
in Fitting
in GUI
some (4) in Core: those require more investigation
herck
17:10 Revision b820dccd: Merge branch 'fixmes' into develop
herck
17:05 Revision 707bdcf1: Impose line width limit (2)
herck
17:03 Revision 8b51f6f6: Impose line width limit
herck
17:01 Revision 0219b0ef: Commenting in Formfactors
pospelov
16:58 Revision c140fb11: Removed unnecessary TODO
herck
16:57 Revision 56ed7178: Made cast from AxisBin to AxisDouble explicit (TODO removed)
herck
16:50 Revision 2af9a153: Removed compilation warning
herck
16:40 Revision ed200e0f: Fixed refractive index check (removed FIXME)
herck
16:18 Revision 2c19f2b2: Refactored ParticleDecoration and removed TODO
herck
15:35 Revision adec994e: Removed commented and obsolete code
herck
15:35 Revision f5ff8572: regenerated python API for Simulation
herck
15:34 Revision d3f24cb1: Added TODO part in unit test
herck
15:15 Revision 9127c5e0: Removed TODO in SpecularMagnetic::getImExponential
herck
15:09 Revision f7d239ae: Remove fixme in ConvolutionDetectorResolution
herck
15:03 Revision 1bfda63c: Remove smearing from z-axis tilting in Simulation
herck
15:03 Revision 6ad3c001: Impose line width limit
herck
13:35 Bug #508 (Resolved): Pacman assymetry in peaks of meso crystal simulation
The asymmetry is a result of geometric effects, namely the position of the Ewald sphere with respect to a non spheric... herck
13:06 Revision c4aa4d36: Merge branch 'pacman' into develop
herck
13:04 Revision 3ca74317: Update Xcode project and fix compile error there
herck
11:25 Revision 53372d1c: Minor changes to ff.tex
ganeva
08:49 Revision 84dfee84: Merge branch 'fixminus' into develop
ganeva
08:49 Revision 0389f9fc: -iqr changed to iqr in the formfactor ripple.
ganeva

13 Dec 2013

16:50 Revision 5adc83c4: Merge branch 'FFSpheroid' into develop
celine
16:49 Revision aafdf3c4: Correction of the formula for the volume of a spheroid
celine
16:45 Revision daba1bc6: Doxygen aesthetic related changes
pospelov
11:46 Revision 1bc0d920: Doxyfile:
- no latex output
- html output goes to BornAgain/html
wuttke
11:10 Revision bfdc75a8: UserAPI: collaboration diagram is switched off
pospelov
11:08 Revision fe093e96: Merge branch 'fix527' into develop
ganeva
11:08 Revision 5147a2ab: Minor changes to the TestRipple2 in App.
ganeva
11:02 Feature #527 (Resolved): Implement the ripple 2 (triangular) formfactor
ganeva
11:02 Feature #527 (Sprint): Implement the ripple 2 (triangular) formfactor
ganeva
10:40 Revision 481f05e4: Merge branch 'mesopythonscript' into develop
Conflicts:
Core/PythonAPI/src/PythonModule.cpp
Core/python_module.pri
herck
10:20 Bug #508 (Sprint): Pacman assymetry in peaks of meso crystal simulation
herck
10:04 Revision 897811f7: Merge conflicts resolved.
ganeva
09:19 Feature #481 (Resolved): Implement/review Cybooctaedron formfactor
celine
09:19 Feature #483 (Resolved): Implement/review Anisotropic pyramid formfactor
celine
09:00 Revision 984dac21: Python functional test for the ripple2 formfactor.
ganeva

12 Dec 2013

17:02 Feature #305 (Rejected): Implement simulation of lateral structured test sample from Stefan Mattauch
We will create new support item after meeting with Stefan (in the right subproject) herck
16:34 Revision a07440b7: PythonAPI regenerated
pospelov
16:22 Refactoring #507 (Resolved): Wrap SampleBuilder in the shared pointer
pospelov
16:22 Refactoring #507 (Sprint): Wrap SampleBuilder in the shared pointer
pospelov
16:20 Revision 0e84f93b: PythonAPI regenerated
pospelov
15:51 Revision 60ae3d9b: Fixed small bug
herck
15:49 Revision 474b87fe: Merge branch 'SampleBuilderPtr'
Conflicts:
Core/PythonAPI/src/FormFactorHemiEllipsoid.pypp.cpp
Core/PythonAPI/src/FormFactorSpheroid.pypp.cpp
Core...
pospelov
15:46 Revision 9e84d435: ThreadInfo is cloned now in Simulation, ThreadInfo is exposed to python
pospelov
15:35 Revision bd1530f9: 1. The FormFactorRipple2 (triangular) is implemented.
2. File TestRipple2 in Apps is created to test the formfactor.
3. Unittests for the Ripple2 are created.
4. Functiona...
ganeva
15:23 Revision 82d6eb79: Added form factor for full sphere which is integrated over a uniform radius di...
herck
09:37 Refactoring #232 (Resolved): rename "min" and "max" in TRange, ...
Anonymous
09:37 Refactoring #232 (Sprint): rename "min" and "max" in TRange, ...
Anonymous
09:36 Testing #529 (Resolved): Create TRange unit test
Anonymous
09:36 Testing #529 (Sprint): Create TRange unit test
Anonymous
09:35 Testing #530 (Resolved): Create AxisBin unit test
Anonymous
09:35 Testing #530 (Sprint): Create AxisBin unit test
Anonymous

11 Dec 2013

13:45 Revision e7358862: Problem with failure of unit test form factor fixed.
EllipsoidalCylinder and HemiEllipsoid commented out in StandardSamples.cpp celine
13:20 Revision 5ee65c8a: Clean-up in source tree
celine
13:06 Revision 5631c90e: Merge branch 'FFCuboctahedron' into develop
Conflicts:
App/inc/StandardSamples.h
App/src/SampleFactory.cpp
App/src/StandardSamples.cpp
Core/PythonAPI/src/For...
celine
11:42 Revision 778c86e9: New form factors for Spheroid, FullSpheroid, EllipsoidalCylinder, HemiEllipsoi...
celine
11:41 Feature #386 (Backlog): Add extra functionality for neutron polarization
herck
11:40 Documentation #387 (Backlog): Provide correct calculation of detected intensity for polarization
herck
11:18 Revision 9ea04ff9: Merge branch 'origin/TestMahadi'
mahadi
11:11 Revision fa9069e2: Refactored class TRange (Refactoring #232)
mahadi

10 Dec 2013

18:05 Revision af7ad8ff: Added unit test for:
1. TRange
2. AxisBin
mahadi
18:04 Revision 2745032c: Replaced int with double where needed.
mahadi
17:53 Revision 6a29d4c0: SampleBuilder is moved to shred_ptr
pospelov
16:00 Revision c7aace04: Layer with roughness functional test is adjusted to new standarts. Plotting pr...
ganeva
15:50 Refactoring #232 (Backlog): rename "min" and "max" in TRange, ...
Anonymous
12:57 Testing #530 (Archived): Create AxisBin unit test
Anonymous
11:45 Testing #529 (Archived): Create TRange unit test
Anonymous
09:38 Feature #527 (Archived): Implement the ripple 2 (triangular) formfactor
Implement the ripple 2 (triangular) formfactor ganeva
09:37 Feature #526 (Archived): Implement the ripple 1 (gaussian) formfactor
Implement the ripple 1 (gaussian) formfactor ganeva
09:35 Revision 97efa3c0: Resolve merge conflict for SampleBuilderFactory.cpp.
ganeva
09:34 Testing #524 (Resolved): Produce a functional test for the layer with roughness
ganeva
09:32 Revision 91446fae: Functional test for the layer with correlated roughness is implemented.
ganeva

09 Dec 2013

17:58 Refactoring #522 (Resolved): Clean up in App and FunctionalTests
pospelov
17:53 Revision 4ef5a35c: Merge branch 'CleanInTests' into develop
pospelov
17:53 Revision 3dbac225: performance update
pospelov
17:38 Revision bbca707c: Performance test now uses mesocrystal from SimulationRegistry
pospelov
17:20 Revision 597b126f: Removed BAConfigure.h from git
pospelov
16:57 Revision f47eee7b: Removed *.pro machinery from FunctionalTestCore
pospelov
16:51 Revision 324840c3: Functional test and the reference data for layer with correlated roughness.
ganeva
16:44 Revision 5a078678: PolarizedDWBAZeroMag test cleanup
pospelov
16:33 Revision cd4e0493: MesoCrystal01 test cleanup
pospelov
16:13 Revision dd3b8e50: Unit test for all form factors
celine
15:15 Revision 19bbf64a: IsGISAXS11 test cleanup
pospelov
15:06 Revision eae5875e: IsGISAXS10 test cleanup
pospelov
14:57 Revision a5c72bd8: IsGISAXS09 test cleanup
pospelov
14:33 Revision 8e2a54a3: IsGISAXS08 test cleanup
pospelov
13:42 Revision db00c9a5: IsGISAXS07 test cleanup
pospelov
13:25 Revision 81732723: IsGISAXS06 test cleanup
pospelov
12:00 Revision 8963b12c: IsGISAXS04 test cleanup
pospelov
11:41 Revision a8750367: IsGISAXS02 and IsGISAXS03 cleanup
pospelov
11:16 Revision e42a9d8d: IsGISAXS01 test cleanup
pospelov
 

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