Activity
From 11 Dec 2013 to 09 Jan 2014
09 Jan 2014
- 17:41 Testing #564 (Sprint): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 17:40 Testing #564 (Archived): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 15:56 Revision 5123248d: Analytical expressions for particular cases for the ripple1 formfactor.
- 10:51 Testing #563 (Sprint): Revise Beam unit test
* add Eigen/Polarization oriented tests into existing BeamTest
- 10:50 Testing #563 (Archived): Revise Beam unit test
- 10:44 Testing #562 (Sprint): Implement MatrixRTCoefficients unit test
- 10:44 Testing #562 (Archived): Implement MatrixRTCoefficients unit test
- 10:39 Testing #559 (Sprint): Implement SpecularMatrix unit test
- 10:25 Testing #559 (Archived): Implement SpecularMatrix unit test
- 10:38 Testing #560 (Sprint): Implement ScalarRTCoefficients unit test
- 10:29 Testing #560 (Archived): Implement ScalarRTCoefficients unit test
- 10:38 Testing #561 (Sprint): Implement MathFunctions unit test
- 10:37 Testing #561 (Archived): Implement MathFunctions unit test
- * Eigen::Matrix2d Norm(const Eigen::Matrix2cd &M);
* Eigen::Matrix2d Abs(const Eigen::Matrix2cd &M);
* Eigen::Matri... - 10:31 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
* extent LLDataTest with testing of LLData<Eigen::Matrix2d>
* extent OutputDataTest with testing of OutputData<Ei...- 10:08 Revision f07885d8: Merge branch 'TestParticleDecoration'
- 09:34 Feature #526 (Resolved): Implement the ripple 1 (gaussian) formfactor
- 09:21 Revision ef99c947: Minor changes in TestPerformance
08 Jan 2014
- 17:56 Testing #554 (Resolved): Implement ParticleDecoration unit test
- 11:14 Testing #554 (Sprint): Implement ParticleDecoration unit test
- 11:10 Testing #554 (Archived): Implement ParticleDecoration unit test
- 17:55 Revision 76bfb373: Test for ParticleDecoration
- 16:20 Revision 0f0b4412: Python functional test for the ripple1 formfactor.
- 15:44 Revision e0a765e1: Visitors are modified to include ripples.
- 14:16 Revision 6e3afc16: PythonAPI regenerated
- 13:59 Revision 6129539d: Started working on new TestPerformance2
- 11:55 Revision 65e5f784: Functional tests for the Ripple1.
- 11:15 Testing #555 (Sprint): Implement ParticleCoreShell unit test
- 11:11 Testing #555 (Archived): Implement ParticleCoreShell unit test
- 11:14 Testing #556 (Sprint): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- 11:12 Testing #556 (Archived): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- we need it asup to tackle Eigen alignment problem under windows
- 11:13 Testing #557 (Sprint): Implement OutputData<Eigen::Matrix2d> unit test
- 11:13 Testing #557 (Archived): Implement OutputData<Eigen::Matrix2d> unit test
- to tackle Eigen alignment problem under windows
- 10:58 Feature #521 (Sprint): Implement polarized DWBA with cylindrical particles functional test
- 10:58 Feature #521 (Backlog): Implement polarized DWBA with cylindrical particles functional test
- 10:53 Revision 246abeda: 1. Ripple1 (cosine) formfactor is implemented.
- 2. TestRipple1 files are created in App.
3. Reference file for the functional tests is created. - 10:47 Feature #526 (Sprint): Implement the ripple 1 (gaussian) formfactor
07 Jan 2014
- 17:02 Revision 338373bf: Merge branch 'ripple2analytical' into develop
- 16:30 Revision 22a85fd0: Implemented analytical expresion for the Ripple2 formfactor.
- 15:20 Revision e721993d: Merge branch 'origin/develop'
- 14:54 Feature #553: Provide interface to perform off-specular scattering simulations
- Since the current GISAS calculations do not include the specular part of the reflected wave yet, this information wil...
- 14:51 Feature #553 (Archived): Provide interface to perform off-specular scattering simulations
- This interface has been asked for by different people (Glavic, Mattauch, ...)
The idea is to be able to parametrize ... - 14:49 Revision fdb9ff5c: Merge branch 'TestFit'
- 14:49 Revision f2e2ce47: Removed BAConfigure.h from tracking
- 14:37 Testing #445 (Resolved): Implement BornAgainFit unit test infrastructure
- 14:37 Testing #551 (Resolved): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 14:32 Revision f4f551eb: 1. BornAgainFit unit test infrastructure
- 2. Tests for AttLimits, FitParameter, FitParameterLinked
- 13:59 Revision d12425d2: Merge branch 'ripple2example' into develop
- 13:57 Revision 2e9a7150: Example for the triangular ripple.
03 Jan 2014
- 15:59 Bug #461 (Resolved): Provide compilation on latest MacOS Maverick
- 15:26 Revision 53608fef: Commented debug output
- 13:58 Revision ab2aade4: Debug printing to resolve isgisaxs08 test failure
- 11:16 Revision c51c2b58: gtest-1.7.0 is used now to provide compilation under Maverick
- 10:44 Revision 4d0da079: Compilation fixes for Maverick
02 Jan 2014
- 14:38 Testing #551 (Sprint): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 14:38 Testing #551 (Archived): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 10:33 Documentation #549 (Sprint): Doxygen API: review form factors description
- 10:20 Documentation #549 (Archived): Doxygen API: review form factors description
- * Possibly add plots with geometrical shapes into corresponding form factor Doxygen API page
- 10:21 Documentation #429 (Backlog): Write Appendix which lists all implemented examples from Examples s...
* and also add examples description into corresponding Doxygen API page- 09:57 Testing #445 (Sprint): Implement BornAgainFit unit test infrastructure
- 09:57 Documentation #546 (Sprint): Complete Appendix with all form factors listed
- 09:56 Documentation #546 (Backlog): Complete Appendix with all form factors listed
- 09:51 Bug #545 (Sprint): PolarizedDWBAZeroMag functional test fails under windows
- 09:49 Bug #461 (Sprint): Provide compilation on latest MacOS Maverick
20 Dec 2013
- 13:43 Documentation #546 (Archived): Complete Appendix with all form factors listed
- 13:08 Bug #545 (Archived): PolarizedDWBAZeroMag functional test fails under windows
- 13:07 Feature #544 (Archived): Provide example with user's form factor extension from python
- * FormFactor of some simple shape has to be created in python and passed to C++ simulation
* provide corresponding... - 13:05 Testing #537 (Resolved): Create MultiLayer unit test
- 11:24 Testing #537 (Sprint): Create MultiLayer unit test
- 13:05 Revision 7f980974: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 13:05 Feature #543 (Archived): Review release script
- We have release procedure, described in
http://apps.jcns.fz-juelich.de/redmine/projects/bornagain/wiki/Making_releas... - 13:05 Revision aef1642e: Aesthetics + eclipse project file update
- 12:56 Revision 9090db1c: Merge branch 'TestMultiLayer' into develop
- 12:55 Revision 80a43cdf: Defence against negative Layer thickness in MultiLayer, clean-up in MultiLayer...
- 11:39 Feature #542 (Rejected): Windows installer: check existence of BornAgain and uninstall it if exists
- Currently this feature works only partly and looks more like a bug: installer will uninstall existing version of Born...
- 11:15 Testing #524 (Archived): Produce a functional test for the layer with roughness
- 11:15 Feature #527 (Archived): Implement the ripple 2 (triangular) formfactor
- 11:15 Feature #540 (Archived): Provide consistent propagation and composition of transformations
- 11:15 Bug #512 (Archived): Particles' magnetic materials are not transformed
- 11:15 Bug #508 (Archived): Pacman assymetry in peaks of meso crystal simulation
- 11:15 Bug #509 (Archived): OutputData<T>.setAllTo(value) crashes (nullpointer) after clear()
- 11:15 Support #511 (Archived): Provide example with 2 parameter fit of spheres in a hex lattice
- 11:15 Bug #516 (Archived): Simulation of mesocrystal differs when doing 4 vs 8 threads
- 11:15 Feature #483 (Archived): Implement/review Anisotropic pyramid formfactor
- 11:15 Feature #435 (Archived): Request: provide JFM with the python script simulating the sample_jfm1
- 11:15 Feature #494 (Archived): Implement all IsGISAXS distribution functions
- 11:15 Bug #499 (Archived): Simulated formfactors sphere (for H=2R) and fullsphere are squeezed
- 11:15 Bug #505 (Archived): Investigate and possibly fix transformations for polarized mesocrystals
- 11:15 Feature #477 (Archived): Implement/review Cone formfactor
- 11:15 Feature #478 (Archived): Implement/review Tethraedron formfactor
- 11:15 Feature #479 (Archived): Implement/review Prism6 formfactor
- 11:15 Feature #480 (Archived): Implement/review Cone6 formfactor
- 11:15 Feature #481 (Archived): Implement/review Cybooctaedron formfactor
- 11:15 Refactoring #416 (Archived): CHeck and fix //TODO's and //FIXME's
- 11:15 Documentation #489 (Archived): Python docstrings
- 11:15 Documentation #426 (Archived): Examples: prepare C++ standalone example in Examples section
- 11:15 Feature #430 (Archived): Examples: prepare example with core shell nanoparticles
- 11:15 Documentation #432 (Archived): Examples: prepare example with correlated roughness interface
- 11:15 Refactoring #522 (Archived): Clean up in App and FunctionalTests
- 11:15 Testing #529 (Archived): Create TRange unit test
- 11:15 Testing #530 (Archived): Create AxisBin unit test
- 11:15 Testing #535 (Archived): Modify Particle unit test
- 11:15 Testing #536 (Archived): Create FTDistributions unit test
- 11:15 Testing #414 (Archived): Implement functional test: polarized DWBA with zero magnetic field
- 11:15 Feature #506 (Archived): Refactor all tests to use new SimulationRegistry
- 11:15 Refactoring #507 (Archived): Wrap SampleBuilder in the shared pointer
- 11:15 Documentation #471 (Archived): Write down formalism for polarized DWBA on embedded particles
- 11:15 Documentation #475 (Archived): Create prototype of latex (pdf) page representing form factor
- 11:15 Documentation #501 (Archived): API reference for manual
- 11:15 Feature #410 (Archived): Review and improve on mesocrystal form factors
- 11:15 Bug #469 (Archived): Review form factor calculation for big particle dimensions
- 11:15 Testing #413 (Archived): Repair MesoCrystal functional test
- 11:15 Refactoring #232 (Archived): rename "min" and "max" in TRange, ...
- 11:15 Testing #127 (Archived): Add LLData Unit tests
- 11:15 Feature #288 (Archived): Provide correct implementation of tilted cylinder (and cone) formfactor ...
- 11:15 Refactoring #302 (Archived): Return global static constants in the namespace back
- 11:15 Refactoring #303 (Archived): Drop shared_ptr usage for BasicVector3D
- 11:15 Refactoring #436 (Archived): Refactor ISample, IParameterized and ParameterPool for better access...
- 11:15 Feature #454 (Archived): Change behavior of setParameterValue
- 10:32 Revision bae7fca3: Merge
- 10:32 Revision 87d209b5: Merge
- 10:32 Revision 6e3f98ac: Release 0.9.3
- 10:17 Revision 2516aedc: Fix in release script
19 Dec 2013
- 18:04 Revision 7a02fb53: Added MultiLayer Unit Test
- 16:39 Revision 0ff61006: User manual fix.
- 16:13 Revision d9dc73f8: Ready to release
- 16:06 Feature #405 (Rejected): Move filepath definitions to one single class/namespace
- This was done already by introducing FileSystem.h and BAConfigure.h
- 15:27 Revision dd923344: Attempt (failed) to cure bug with PolarizedDWBAZeroMagField under windows.
- 14:27 Revision 86081f82: Removed include (was the problem under Debian)
- 14:17 Revision 355101cf: Corrected Include of WinDllMacros.h in linux
- 14:13 Revision 8064d009: Automatic include of WinDllMacros.h in all files on Mac and linux
- 13:39 Revision 9a727f28: Winbuild: more exports to the dll, WinDllMacros now automatically included fro...
- 11:46 Revision b4bda7e3: Fixed minor warnings from PVS studio, attempt under Windows to resolve unreso...
- 11:21 Revision b79818b2: Winbuild: few dllexports via BA_CORE_API
- 09:29 Revision e14d6d4e: PythonAPI regenerated, IComposite iterators removed from Python API due to Win...
- 09:13 Revision 704033f6: Updates in README files
18 Dec 2013
- 18:21 Revision 9d34c3ba: CMake fix for python search in Windows
- 17:47 Feature #79 (Resolved): Framework general: measure Eigen library performance in the view of gsl_m...
I accept this issue since we converged on Eigen already. Also Walter has implemented recently Eigen based transfo...- 17:45 Documentation #200 (Rejected): Doxygen comments for all classes
In the frame of the last doxygen UserAPI activity I have placed comments to all files and all classes (@class). But...- 16:44 Feature #464 (Rejected): Investigate running TeamCity build agent on Windows server
This has to wait until Nicolas Arend will start his new build server.
Hopefully, we will be able to use that ser...- 16:40 Revision 21441387: New version number
- 16:30 Documentation #369 (Backlog): UserManual campaign
- 16:30 Documentation #501 (Resolved): API reference for manual
* Rearranged doxygen page and lots of group comments in the code. The idea is to have UserAPI classes separated f...- 16:29 Feature #540 (Resolved): Provide consistent propagation and composition of transformations
- 09:45 Feature #540 (Archived): Provide consistent propagation and composition of transformations
- This issue is related to Support item 472.
- 16:25 Revision fc5974f8: Doxygen: comments in geometry
- 16:19 Revision cba23daa: Merge branch 'UserAPI2'
- Conflicts:
Core/Core.pro
Core/Geometry/src/Transform3D.cpp
Core/python_module.pri
Fit/python_module.pri - 16:15 Revision 5499745d: New doxygen docs switched on, Doxyfile.in is introduced for automatic propagat...
- 16:04 Revision ef9c756c: Doxygen: more group comments
- 15:34 Revision 9570a91c: Fixed incompatible interfaces after merge
- 15:20 Revision 7e402c98: Merge branch 'transformations' into develop
- 13:25 Revision 2bc7232c: Cache inverse of transformations and add interface for applying the inverse to...
- 13:07 Revision 81831b9e: Propagate transformations from MesoCrystal to its member objects; fixed some bugs
- 11:21 Revision 71c6c4f7: Fixed sign in the qy*d term for the ripple2 formfactor.
- 10:36 Revision 69c7d4cf: Propagate transformations in LatticeBasis and removed createTransformedLattice...
- 10:23 Revision a13f7688: Merge branch 'FFSpheroid1' into develop
- 10:22 Revision 3cdafd61: Correction of the expression of Spheroid’s form factor.
- Addition of missing IsGisxas files (*.ima)
- 07:56 Refactoring #538 (Resolved): Implementation of a consistent order of variables for all form factors
- For all shapes, we should have something like Formfactor(dimension_x, dimension_y, dimension_z...)
For example, at...
17 Dec 2013
- 18:01 Revision 95d1494f: Doxygen: further group comments in Tools
- 17:59 Testing #537 (Archived): Create MultiLayer unit test
- 17:56 Testing #536 (Resolved): Create FTDistributions unit test
- 17:56 Testing #536 (Sprint): Create FTDistributions unit test
- 13:42 Testing #536 (Archived): Create FTDistributions unit test
- 17:44 Revision c58ee6f8: Doxygen: more grouping comments in StandardSamples and FormFactors
- 17:42 Revision 12b8a759: added setParameter test
- 17:37 Revision 077caf68: Propagate transformation of ParticleCoreShell to relative position
- 17:25 Revision 718398b5: Propagation of transformations in ParticleCoreShell
- 17:06 Revision 8dbc8841: Doxygen: comments in Algorithms and Samples
- 17:06 Revision 2da123b6: FTDistributions unit test
- 16:35 Revision 164909c0: Adapted python tests to new transformation interface
- 16:12 Revision 2606aabe: Restored general rotational transformations for 3d vectors (Transform3D); remo...
- 14:10 Revision 833c957a: Get rid from qmake *.pro and *.pri machinery
- 13:52 Testing #535 (Resolved): Modify Particle unit test
- 13:52 Testing #535 (Sprint): Modify Particle unit test
- 13:41 Testing #535 (Archived): Modify Particle unit test
- 13:03 Revision ddddf112: Merge branch 'origin/TestParticle'
- 12:52 Revision 9f0115b7: Exteneded particle test with different constructors, Transform, set params.
- 11:29 Revision 45e92747: Doxygen: more comments in files, new directory FitKernel instead of Factory
- 11:09 Revision 6d6bb849: Doxygen: commenting files
16 Dec 2013
- 18:08 Revision 780deb78: Merge UserAPI
- 18:07 Revision 43416d4f: Merge branch 'UserAPI'
- Conflicts:
App/src/IsGISAXSTools.cpp
Core/Algorithms/src/Simulation.cpp - 17:57 Revision 4093122a: BA and AppVersion namespaces are now BornAgain namespace
- 17:21 Revision 66084a0f: Doxygen: get rid from question marks in comments
- 17:16 Refactoring #416 (Resolved): CHeck and fix //TODO's and //FIXME's
- Leftover todo's and fixme's:
in Fitting
in GUI
some (4) in Core: those require more investigation - 17:10 Revision b820dccd: Merge branch 'fixmes' into develop
- 17:05 Revision 707bdcf1: Impose line width limit (2)
- 17:03 Revision 8b51f6f6: Impose line width limit
- 17:01 Revision 0219b0ef: Commenting in Formfactors
- 16:58 Revision c140fb11: Removed unnecessary TODO
- 16:57 Revision 56ed7178: Made cast from AxisBin to AxisDouble explicit (TODO removed)
- 16:50 Revision 2af9a153: Removed compilation warning
- 16:40 Revision ed200e0f: Fixed refractive index check (removed FIXME)
- 16:18 Revision 2c19f2b2: Refactored ParticleDecoration and removed TODO
- 15:35 Revision adec994e: Removed commented and obsolete code
- 15:35 Revision f5ff8572: regenerated python API for Simulation
- 15:34 Revision d3f24cb1: Added TODO part in unit test
- 15:15 Revision 9127c5e0: Removed TODO in SpecularMagnetic::getImExponential
- 15:09 Revision f7d239ae: Remove fixme in ConvolutionDetectorResolution
- 15:03 Revision 1bfda63c: Remove smearing from z-axis tilting in Simulation
- 15:03 Revision 6ad3c001: Impose line width limit
- 13:35 Bug #508 (Resolved): Pacman assymetry in peaks of meso crystal simulation
- The asymmetry is a result of geometric effects, namely the position of the Ewald sphere with respect to a non spheric...
- 13:06 Revision c4aa4d36: Merge branch 'pacman' into develop
- 13:04 Revision 3ca74317: Update Xcode project and fix compile error there
- 11:25 Revision 53372d1c: Minor changes to ff.tex
- 08:49 Revision 84dfee84: Merge branch 'fixminus' into develop
- 08:49 Revision 0389f9fc: -iqr changed to iqr in the formfactor ripple.
13 Dec 2013
- 16:50 Revision 5adc83c4: Merge branch 'FFSpheroid' into develop
- 16:49 Revision aafdf3c4: Correction of the formula for the volume of a spheroid
- 16:45 Revision daba1bc6: Doxygen aesthetic related changes
- 11:46 Revision 1bc0d920: Doxyfile:
- - no latex output
- html output goes to BornAgain/html - 11:10 Revision bfdc75a8: UserAPI: collaboration diagram is switched off
- 11:08 Revision fe093e96: Merge branch 'fix527' into develop
- 11:08 Revision 5147a2ab: Minor changes to the TestRipple2 in App.
- 11:02 Feature #527 (Resolved): Implement the ripple 2 (triangular) formfactor
- 11:02 Feature #527 (Sprint): Implement the ripple 2 (triangular) formfactor
- 10:40 Revision 481f05e4: Merge branch 'mesopythonscript' into develop
- Conflicts:
Core/PythonAPI/src/PythonModule.cpp
Core/python_module.pri - 10:20 Bug #508 (Sprint): Pacman assymetry in peaks of meso crystal simulation
- 10:04 Revision 897811f7: Merge conflicts resolved.
- 09:19 Feature #481 (Resolved): Implement/review Cybooctaedron formfactor
- 09:19 Feature #483 (Resolved): Implement/review Anisotropic pyramid formfactor
- 09:00 Revision 984dac21: Python functional test for the ripple2 formfactor.
12 Dec 2013
- 17:02 Feature #305 (Rejected): Implement simulation of lateral structured test sample from Stefan Mattauch
- We will create new support item after meeting with Stefan (in the right subproject)
- 16:34 Revision a07440b7: PythonAPI regenerated
- 16:22 Refactoring #507 (Resolved): Wrap SampleBuilder in the shared pointer
- 16:22 Refactoring #507 (Sprint): Wrap SampleBuilder in the shared pointer
- 16:20 Revision 0e84f93b: PythonAPI regenerated
- 15:51 Revision 60ae3d9b: Fixed small bug
- 15:49 Revision 474b87fe: Merge branch 'SampleBuilderPtr'
- Conflicts:
Core/PythonAPI/src/FormFactorHemiEllipsoid.pypp.cpp
Core/PythonAPI/src/FormFactorSpheroid.pypp.cpp
Core... - 15:46 Revision 9e84d435: ThreadInfo is cloned now in Simulation, ThreadInfo is exposed to python
- 15:35 Revision bd1530f9: 1. The FormFactorRipple2 (triangular) is implemented.
- 2. File TestRipple2 in Apps is created to test the formfactor.
3. Unittests for the Ripple2 are created.
4. Functiona... - 15:23 Revision 82d6eb79: Added form factor for full sphere which is integrated over a uniform radius di...
- 09:37 Refactoring #232 (Resolved): rename "min" and "max" in TRange, ...
- 09:37 Refactoring #232 (Sprint): rename "min" and "max" in TRange, ...
- 09:36 Testing #529 (Resolved): Create TRange unit test
- 09:36 Testing #529 (Sprint): Create TRange unit test
- 09:35 Testing #530 (Resolved): Create AxisBin unit test
- 09:35 Testing #530 (Sprint): Create AxisBin unit test
11 Dec 2013
- 13:45 Revision e7358862: Problem with failure of unit test form factor fixed.
- EllipsoidalCylinder and HemiEllipsoid commented out in StandardSamples.cpp
- 13:20 Revision 5ee65c8a: Clean-up in source tree
- 13:06 Revision 5631c90e: Merge branch 'FFCuboctahedron' into develop
- Conflicts:
App/inc/StandardSamples.h
App/src/SampleFactory.cpp
App/src/StandardSamples.cpp
Core/PythonAPI/src/For... - 11:42 Revision 778c86e9: New form factors for Spheroid, FullSpheroid, EllipsoidalCylinder, HemiEllipsoi...
- 11:41 Feature #386 (Backlog): Add extra functionality for neutron polarization
- 11:40 Documentation #387 (Backlog): Provide correct calculation of detected intensity for polarization
- 11:18 Revision 9ea04ff9: Merge branch 'origin/TestMahadi'
- 11:11 Revision fa9069e2: Refactored class TRange (Refactoring #232)
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