Activity
From 01 Jan 2014 to 30 Jan 2014
30 Jan 2014
- 21:53 Revision 540ce47a: Performance tweaks: const reference in all evaluate methods
- 20:46 Revision 9187e047: Performance tweaks: switching to mixed bessel functions
- 16:11 Bug #191 (Rejected): Gui: improve performance of TQtWidget in the case of CONT4Z option
I drop this issue since there is more fundamental problem connected with Qt5 and ROOT.- 16:08 Testing #561 (Resolved): Implement MathFunctions unit test
- 16:08 Bug #220 (Resolved): Gui: provide GUI compilation under Qt5/linux
I was not able to solve ROOT/Qt5 problem. Instead, I have implemented new scientific graphics from qcustomplot li...- 16:06 Revision 3ab59608: Cleanup
- 16:05 Revision 34acf02f: Cleanup
- 16:04 Revision 1a7fb82f: Merge branch 'Qt5Linux'
- 16:03 Revision 62146965: qtproperty browser is relocated to 'external' directory, code is updated from ...
- 15:04 Feature #491 (Rejected): Provide https access to git repository
- For access to a read-only git:// repository, the user needs to have port 9418 open, which is commonly blocked by corp...
- 14:57 Feature #304 (Resolved): Provide compilation of HipGISAXS and run test simulation on GPU
- Compilation of hipgisaxs turned out to present some difficulties. The steps for compiling in linux gcc 4.8 with CUDA ...
- 14:55 Feature #304 (Sprint): Provide compilation of HipGISAXS and run test simulation on GPU
- 14:53 Revision b55cb855: ba_fancytabbar replaced by one from Manhattan style, cleanup
- 13:38 Revision a316fcbc: JobView switched to the new graphics
- 11:03 Revision 91bfaac0: qcustomplot library inserted in the project
29 Jan 2014
- 18:21 Revision 973862be: Gui restored ISample to IView functionality
- 17:02 Revision a6f1a7f5: Disabled "big form factor" calculation
- 16:28 Revision 5d7943d5: Qt5 linux fixes (widgetbox, tqtwidgets)
- 16:28 Revision 55573844: Qt5 ROOT related fixes
- 16:27 Revision 627459ab: Code cleanup
- 16:10 Revision 88ce0526: Merge branch 'AlignmentTest'
- 13:05 Revision 9187c893: Unit tests with Eigen Matrix for:
- 1. OutputData.h
2. MathFuctions.h - 11:16 Refactoring #168 (Rejected): Create class to hold Experiment, SimulationParameters and ISample
- This issue has been resolved during a previous refactoring.
Simulation holds Experiment, Sample and SimulationParame... - 11:12 Feature #318 (Sprint): Implement beam divergence and wavelength distribution
- 11:10 Feature #513 (Rejected): Composition of transformations
- Already implemented in the refactoring of transformations
- 10:57 Testing #557 (Resolved): Implement OutputData<Eigen::Matrix2d> unit test
- 10:43 Revision 28904cc9: PythonAPI regenerated, bugfix in StandardSamples due to changes in FFCylinder ...
28 Jan 2014
- 15:39 Revision 096b8c63: Merge branch 'fixman' into develop
- 15:38 Revision cc7a43e0: Equations for the ripple formfactors in UserManual.
- 15:11 Feature #571 (Resolved): Replace real Bessel with complex one where needed
- 14:57 Revision 6385d7ab: Replace Bessel functions with their complex version where needed
- 14:57 Revision d4f60fe7: Merge branch 'bessel'
- 14:21 Revision 726c25c0: Static
- 13:35 Revision 92786ae8: Merge branch 'MesoFit'
- Conflicts:
Core/PythonAPI/src/PythonModule.cpp
Fit/PythonAPI/src/ISquaredFunction.pypp.cpp
Fit/PythonAPI/src/Pytho... - 13:12 Revision 1d33c0c5: O3 optimizaiton replaced by o2
- 13:03 Revision cc295b8d: Updated version of user manual and codes for form factors
- 11:48 Bug #578 (Archived): Initialization problem in LLData class
- There is an unhandled exception when it tries to call getTotalSum() for LLData initialized with Eigen matrix.
Fi... - 11:43 Revision ad598a2f: Fix in squared function
- 10:53 Revision ee06e568: Additional check in ChiSquaredModule for mask consistency
- 10:38 Revision 6c9eb021: Fixed unittest fail for the inflongbox. Corrected the evaluate expression for ...
- 10:06 Revision dcc7ce65: Refactoring in ISquaredFunction
27 Jan 2014
- 18:12 Revision 711ef244: New python fitting API exposed
- 18:00 Bug #576 (Resolved): Fix functional tests under Maverick
- 17:47 Revision db8c535c: Merge branch 'isgisaxs08failed' into develop
- 17:47 Revision 1dd9f7df: Changed Isgisaxs08a precision for functional test
- 15:35 Revision 3863da7e: Simplified SetUpLinux in cmake
- 15:27 Revision a29d0309: Merge branch 'isgisaxs08failed' of apps.jcns.fz-juelich.de:BornAgain into isgi...
- 15:27 Revision fdac6136: Regenerated IsGISAXS08 functional test references to take care of previous ins...
- 11:52 Revision 6af657ed: Added necessary header includes
- 10:50 Revision 1db0d01c: Implemented formfactor for an infinitely long box. Unittest fails at the getRa...
- 10:49 Revision 050f0a21: Removed .cproject from tracking, since different platforms need different proj...
24 Jan 2014
- 20:31 Bug #567 (Resolved): Restore PythonAPI generation under Maverick
The problem is with MacPort's gccxml which is now doesn't work with new Mac's clang.
Fortunately (so far) solu...- 20:25 Revision ada05736: PythonAPI regenerated from Maverick
- 17:29 Revision e472f88b: added unit test for LLData<Eigen::Matrix2d>
- 17:27 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
- test for LLData<Eigen::Matrix2d> is done. OutputData<Eigen::Matrix2d> will be completed by next day.
- 16:23 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
- LLData<Eigen::Matrix2d>()->getTotalSum() throws an Exception.
Findings:
In LLData.h(line#217), T result = 0 was a... - 16:35 Revision 0da754a9: Adapted implementation of IF2DParaCrystal
- 15:27 Revision b8074d3f: Refactoring in minimisation strategies.
23 Jan 2014
- 19:43 Feature #446 (Sprint): Repair broken Genetic minimizer after we get rid from ROOT dependency
- 18:43 Revision b06e78d0: Bugfix with Mask + ResolutionFunction + Simulation::normalise
- 15:04 Feature #482 (Resolved): Implement/review Full spheroid formfactor
- 15:04 Feature #484 (Resolved): Implement/review Ellipsoid formfactor
- 15:04 Feature #485 (Resolved): Implement/review Anisotropic hemi-spheroid formfactor
- 15:04 Feature #486 (Resolved): Implement/review Spheroid formfactor
- 14:58 Support #577 (Archived): Implement form factor of truncated cubes
- This feature has been requested by Chang-Yong Kim
from Hard X-ray MicroAnalysis Beamline
http://exshare.lightsou...
22 Jan 2014
- 17:35 Revision 5fa00a51: Unit tests for the following classes:
- 1. ScalarRTCoefficients
2. SpecularMatrix (not sure. need to check)
3. MatrixRTCoefficients
4. Beam (revise existing ... - 17:30 Testing #556 (Resolved): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- 17:29 Testing #559 (Resolved): Implement SpecularMatrix unit test
- Not sure about the functionality. I invoked all public functions. Need to check.
- 17:27 Testing #564 (Resolved): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 16:30 Testing #563 (Resolved): Revise Beam unit test
- 13:23 Revision 1ffaa12a: Fixed some integral-double ambiguities
- 12:42 Bug #576 (Archived): Fix functional tests under Maverick
- 12:36 Testing #562 (Resolved): Implement MatrixRTCoefficients unit test
- 12:12 Revision 713028c7: Trying to find ResolutionFunction bug
21 Jan 2014
- 17:59 Bug #574 (Rejected): Implement check of FFTW version
- The compilation crashes in the middle, if obsolete fftw2 is present on the system instead of fftw3
- 17:50 Feature #553 (Resolved): Provide interface to perform off-specular scattering simulations
- 17:32 Revision f379bf9c: Merge branch 'OffSpec'
- 17:16 Revision 19b12e6e: Added OffSpecSimulation for off-specular simulations
- 17:10 Revision 22b21eea: Python unit test to check masks in intensity data
- 16:53 Revision cf9fc321: Bugfix with exporting into Numpy array IntensityData with mask
- 16:51 Testing #573 (Resolved): Implement DWBASimulation unit test
- 11:46 Testing #573 (Sprint): Implement DWBASimulation unit test
- 11:46 Testing #573 (Archived): Implement DWBASimulation unit test
- 16:34 Revision 42b65099: Bug in MultiLayer while cloning in the absence of layers, new DWBASimulationTest
- 15:46 Testing #560 (Resolved): Implement ScalarRTCoefficients unit test
- 15:25 Revision 192f51d8: Bugfix in OutputDataIterator to have masked areas in multi threaded environmen...
- 11:35 Revision 3f78722d: Exposing missing fitting API in python.
20 Jan 2014
17 Jan 2014
- 15:04 Revision cfd6ee38: Merge branch 'origin/develop'
- 15:04 Revision 12cd5681: Merge branch 'AlignmentTest'
- 14:37 Revision 9ac083f5: Eclipse project settings
- 09:50 Feature #571 (Archived): Replace real Bessel with complex one where needed
- e.g. FormFactorCylinder
- 09:43 Feature #569 (Resolved): Provide complex Bessel functions in C++ by wrapping existing fortran code
New complex bessel functions (modification of C. Bond code from http://www.crbond.com/math.htm) are implemented.
...- 09:39 Revision 27069eab: Merge branch 'ComplexBessel'
- 09:33 Revision 049a1fc5: New complex bessel functions
15 Jan 2014
- 18:55 Revision 35304171: With the following unit tests:
- 1. HomogeneousMaterial test
2. HomogeneousMagneticMaterial test
14 Jan 2014
- 11:15 Revision a38d314c: Merge branch 'fixdebian' into develop
- 11:14 Revision 2780148d: Fixed debian package version in CPackDebian.cmake module.
- 10:46 Revision aead0c69: Fix in nightly build failure
- 10:45 Revision b41b6550: New ComplexBessel applicaiton test
13 Jan 2014
- 18:08 Feature #569 (Sprint): Provide complex Bessel functions in C++ by wrapping existing fortran code
- 10:50 Feature #569 (Archived): Provide complex Bessel functions in C++ by wrapping existing fortran code
- 17:16 Feature #521 (Resolved): Implement polarized DWBA with cylindrical particles functional test
- 17:14 Revision b6000bff: Merge branch 'TestPerf'
- 17:14 Revision 2dd6f049: Performance measurements
- 16:56 Revision c16348b7: Performance measurements
- 16:32 Revision 4a6d0a71: Performance measurements
- 16:29 Revision 40b56cd8: New polmagcylinders2.py functional test with magnetic cylinders and non-zero f...
- 15:21 Revision a04de83d: Cleanup in performance test, new C++ functional test PolDWBAMagCylinders2 for ...
10 Jan 2014
- 16:24 Bug #545 (Resolved): PolarizedDWBAZeroMag functional test fails under windows
This was a bug in DWBASimulation (missed Eigen::Matrix2d::Zero)
- 16:21 Revision 09717838: Fixed bug in DWBA simulation (Eigen::Zero), multiple cmake fixes for windows b...
- 14:09 Documentation #565 (Resolved): Provide simulation and fit examples for spheres with size distribu...
- 10:04 Documentation #565 (Sprint): Provide simulation and fit examples for spheres with size distribution
- 09:54 Documentation #565 (Archived): Provide simulation and fit examples for spheres with size distribu...
- This was requested by Slim Chourou.
I suggest to use such requests as an opportunity to extent out Examples section... - 11:07 Refactoring #211 (Rejected): Get rid from fixRatioBetweenParameters in parameter pool by introduc...
Replaced with more general item #568 (refactoring of ParticleBuilder)- 11:03 Refactoring #568 (Archived): Refactor ParticleBuilder
- * to simplify generation of particles with size distribution
* to have fixed ratio between particle parameters
* re... - 11:01 Revision 502b02b3: Example for ripple 1.
- 11:00 Documentation #566 (Resolved): Provide ripple2 example
- 09:56 Documentation #566 (Sprint): Provide ripple2 example
Wrote example for Examples section using existing functional test- 09:54 Documentation #566 (Archived): Provide ripple2 example
- 10:53 Revision 036d1be4: Fixed comments for Example 009 (triangular ripple).
- 10:40 Revision 092129e0: PythonAPI for ParticleDecoration: generating non-default constructors
- 09:55 Bug #567 (Sprint): Restore PythonAPI generation under Maverick
- 09:55 Bug #567 (Archived): Restore PythonAPI generation under Maverick
09 Jan 2014
- 17:41 Testing #564 (Sprint): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 17:40 Testing #564 (Archived): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 15:56 Revision 5123248d: Analytical expressions for particular cases for the ripple1 formfactor.
- 10:51 Testing #563 (Sprint): Revise Beam unit test
* add Eigen/Polarization oriented tests into existing BeamTest
- 10:50 Testing #563 (Archived): Revise Beam unit test
- 10:44 Testing #562 (Sprint): Implement MatrixRTCoefficients unit test
- 10:44 Testing #562 (Archived): Implement MatrixRTCoefficients unit test
- 10:39 Testing #559 (Sprint): Implement SpecularMatrix unit test
- 10:25 Testing #559 (Archived): Implement SpecularMatrix unit test
- 10:38 Testing #560 (Sprint): Implement ScalarRTCoefficients unit test
- 10:29 Testing #560 (Archived): Implement ScalarRTCoefficients unit test
- 10:38 Testing #561 (Sprint): Implement MathFunctions unit test
- 10:37 Testing #561 (Archived): Implement MathFunctions unit test
- * Eigen::Matrix2d Norm(const Eigen::Matrix2cd &M);
* Eigen::Matrix2d Abs(const Eigen::Matrix2cd &M);
* Eigen::Matri... - 10:31 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
* extent LLDataTest with testing of LLData<Eigen::Matrix2d>
* extent OutputDataTest with testing of OutputData<Ei...- 10:08 Revision f07885d8: Merge branch 'TestParticleDecoration'
- 09:34 Feature #526 (Resolved): Implement the ripple 1 (gaussian) formfactor
- 09:21 Revision ef99c947: Minor changes in TestPerformance
08 Jan 2014
- 17:56 Testing #554 (Resolved): Implement ParticleDecoration unit test
- 11:14 Testing #554 (Sprint): Implement ParticleDecoration unit test
- 11:10 Testing #554 (Archived): Implement ParticleDecoration unit test
- 17:55 Revision 76bfb373: Test for ParticleDecoration
- 16:20 Revision 0f0b4412: Python functional test for the ripple1 formfactor.
- 15:44 Revision e0a765e1: Visitors are modified to include ripples.
- 14:16 Revision 6e3afc16: PythonAPI regenerated
- 13:59 Revision 6129539d: Started working on new TestPerformance2
- 11:55 Revision 65e5f784: Functional tests for the Ripple1.
- 11:15 Testing #555 (Sprint): Implement ParticleCoreShell unit test
- 11:11 Testing #555 (Archived): Implement ParticleCoreShell unit test
- 11:14 Testing #556 (Sprint): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- 11:12 Testing #556 (Archived): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- we need it asup to tackle Eigen alignment problem under windows
- 11:13 Testing #557 (Sprint): Implement OutputData<Eigen::Matrix2d> unit test
- 11:13 Testing #557 (Archived): Implement OutputData<Eigen::Matrix2d> unit test
- to tackle Eigen alignment problem under windows
- 10:58 Feature #521 (Sprint): Implement polarized DWBA with cylindrical particles functional test
- 10:58 Feature #521 (Backlog): Implement polarized DWBA with cylindrical particles functional test
- 10:53 Revision 246abeda: 1. Ripple1 (cosine) formfactor is implemented.
- 2. TestRipple1 files are created in App.
3. Reference file for the functional tests is created. - 10:47 Feature #526 (Sprint): Implement the ripple 1 (gaussian) formfactor
07 Jan 2014
- 17:02 Revision 338373bf: Merge branch 'ripple2analytical' into develop
- 16:30 Revision 22a85fd0: Implemented analytical expresion for the Ripple2 formfactor.
- 15:20 Revision e721993d: Merge branch 'origin/develop'
- 14:54 Feature #553: Provide interface to perform off-specular scattering simulations
- Since the current GISAS calculations do not include the specular part of the reflected wave yet, this information wil...
- 14:51 Feature #553 (Archived): Provide interface to perform off-specular scattering simulations
- This interface has been asked for by different people (Glavic, Mattauch, ...)
The idea is to be able to parametrize ... - 14:49 Revision fdb9ff5c: Merge branch 'TestFit'
- 14:49 Revision f2e2ce47: Removed BAConfigure.h from tracking
- 14:37 Testing #445 (Resolved): Implement BornAgainFit unit test infrastructure
- 14:37 Testing #551 (Resolved): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 14:32 Revision f4f551eb: 1. BornAgainFit unit test infrastructure
- 2. Tests for AttLimits, FitParameter, FitParameterLinked
- 13:59 Revision d12425d2: Merge branch 'ripple2example' into develop
- 13:57 Revision 2e9a7150: Example for the triangular ripple.
03 Jan 2014
- 15:59 Bug #461 (Resolved): Provide compilation on latest MacOS Maverick
- 15:26 Revision 53608fef: Commented debug output
- 13:58 Revision ab2aade4: Debug printing to resolve isgisaxs08 test failure
- 11:16 Revision c51c2b58: gtest-1.7.0 is used now to provide compilation under Maverick
- 10:44 Revision 4d0da079: Compilation fixes for Maverick
02 Jan 2014
- 14:38 Testing #551 (Sprint): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 14:38 Testing #551 (Archived): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 10:33 Documentation #549 (Sprint): Doxygen API: review form factors description
- 10:20 Documentation #549 (Archived): Doxygen API: review form factors description
- * Possibly add plots with geometrical shapes into corresponding form factor Doxygen API page
- 10:21 Documentation #429 (Backlog): Write Appendix which lists all implemented examples from Examples s...
* and also add examples description into corresponding Doxygen API page- 09:57 Testing #445 (Sprint): Implement BornAgainFit unit test infrastructure
- 09:57 Documentation #546 (Sprint): Complete Appendix with all form factors listed
- 09:56 Documentation #546 (Backlog): Complete Appendix with all form factors listed
- 09:51 Bug #545 (Sprint): PolarizedDWBAZeroMag functional test fails under windows
- 09:49 Bug #461 (Sprint): Provide compilation on latest MacOS Maverick
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