Activity
From 13 Jan 2014 to 11 Feb 2014
11 Feb 2014
- 13:11 Documentation #589 (Archived): Reduce size in Mb of user manual
eps files with form factors are too huge.
Consider 100x100 channels in the histogram (instead of current 500x500) ...- 10:37 Feature #465 (Sprint): Organize BornAgain mail list with subscription
- 10:37 Feature #588 (Rejected): Extend OutputData with data structure responsible for masking and weight...
- 10:34 Feature #169 (Rejected): Implement OutputData mask to have union of two masked areas
We have preliminary agreed, that we are going to put mask/weight coefficients inside OutputData itself. So no need ...- 10:27 Feature #119 (Rejected): Fitting: implement boostrapping fit strategy to deal with local minima d...
We have implemented already the possibility to use mixture of stochastic (Genetic) and gradient descent algorithm...- 10:11 Feature #587 (Long Term Idea): Fit: investigate objective function alternatives
In image processing there are a number of "image similarity metrics" used for image comparison.
* Mean squares m...- 10:05 Feature #586 (Rejected): Investigate chi2-like objective functions
- Using sample cylinders without interference, two fit parameters (cylinder height and cylinder radius).
Plot the va...
10 Feb 2014
- 15:34 Feature #583 (Sprint): Implement beam divergence functional test
- 15:29 Feature #393 (Sprint): Create Mac installer
07 Feb 2014
- 18:28 Feature #12: Core: SLD: Calculation of refractive index for x-rays and neutrons from database
- There is related code in Mantid, which ought to be moved into a separate library ...
- 16:23 Bug #545 (Archived): PolarizedDWBAZeroMag functional test fails under windows
- 16:23 Testing #551 (Archived): Implement tests for AttLimits, FitParameter, FitParameterLinked
- 16:23 Testing #554 (Archived): Implement ParticleDecoration unit test
- 16:23 Testing #556 (Archived): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- 16:23 Testing #557 (Archived): Implement OutputData<Eigen::Matrix2d> unit test
- 16:23 Testing #445 (Archived): Implement BornAgainFit unit test infrastructure
- 16:23 Feature #521 (Archived): Implement polarized DWBA with cylindrical particles functional test
- 16:23 Testing #537 (Archived): Create MultiLayer unit test
- 16:23 Documentation #546 (Archived): Complete Appendix with all form factors listed
- 16:17 Documentation #546 (Resolved): Complete Appendix with all form factors listed
- 16:23 Documentation #549 (Archived): Doxygen API: review form factors description
- 16:18 Documentation #549 (Resolved): Doxygen API: review form factors description
- 16:23 Feature #304 (Archived): Provide compilation of HipGISAXS and run test simulation on GPU
- 16:23 Feature #318 (Archived): Implement beam divergence and wavelength distribution
- 16:23 Feature #400 (Archived): Move QtVariantManager into directory "externals" as static library
- 16:23 Feature #446 (Archived): Repair broken Genetic minimizer after we get rid from ROOT dependency
- 16:22 Bug #461 (Archived): Provide compilation on latest MacOS Maverick
- 16:22 Feature #543 (Archived): Review release script
- 16:22 Bug #567 (Archived): Restore PythonAPI generation under Maverick
- 16:22 Testing #573 (Archived): Implement DWBASimulation unit test
- 16:22 Testing #560 (Archived): Implement ScalarRTCoefficients unit test
- 16:22 Testing #561 (Archived): Implement MathFunctions unit test
- 16:22 Testing #562 (Archived): Implement MatrixRTCoefficients unit test
- 16:22 Testing #563 (Archived): Revise Beam unit test
- 16:22 Testing #564 (Archived): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 16:22 Testing #559 (Archived): Implement SpecularMatrix unit test
- 16:22 Feature #482 (Archived): Implement/review Full spheroid formfactor
- 16:22 Feature #484 (Archived): Implement/review Ellipsoid formfactor
- 16:22 Feature #485 (Archived): Implement/review Anisotropic hemi-spheroid formfactor
- 16:22 Feature #486 (Archived): Implement/review Spheroid formfactor
- 16:22 Documentation #565 (Archived): Provide simulation and fit examples for spheres with size distribu...
- 16:22 Documentation #566 (Archived): Provide ripple2 example
- 16:22 Feature #526 (Archived): Implement the ripple 1 (gaussian) formfactor
- 16:21 Bug #576 (Archived): Fix functional tests under Maverick
- 16:21 Bug #582 (Archived): Silent sigmentation fault in InterferenceFunction2DLattice
- 16:21 Feature #553 (Archived): Provide interface to perform off-specular scattering simulations
- 16:21 Feature #569 (Archived): Provide complex Bessel functions in C++ by wrapping existing fortran code
- 16:21 Feature #571 (Archived): Replace real Bessel with complex one where needed
- 16:21 Bug #220 (Archived): Gui: provide GUI compilation under Qt5/linux
06 Feb 2014
- 15:25 Documentation #584 (Archived): Write small explanation about core shell form factor in FormFactor...
- 15:24 Feature #400 (Resolved): Move QtVariantManager into directory "externals" as static library
- 15:24 Feature #400: Move QtVariantManager into directory "externals" as static library
- Actually it is done already.
- 15:23 Feature #400 (Sprint): Move QtVariantManager into directory "externals" as static library
- 15:21 Feature #583 (Rejected): Implement beam divergence functional test
- I still think that in addition to unit testing major features should be covered by functional tests.
I suggest, when... - 15:17 Feature #318 (Resolved): Implement beam divergence and wavelength distribution
- 15:17 Documentation #427 (Backlog): User Examples campaign
- 15:17 Testing #555 (Backlog): Implement ParticleCoreShell unit test
- 13:58 Feature #543 (Resolved): Review release script
05 Feb 2014
- 16:08 Bug #582 (Resolved): Silent sigmentation fault in InterferenceFunction2DLattice
- 14:43 Bug #582 (Sprint): Silent sigmentation fault in InterferenceFunction2DLattice
- 10:03 Bug #582 (Archived): Silent sigmentation fault in InterferenceFunction2DLattice
- Silent sigmentation fault in InterferenceFunction2DLattice if the probability distribution function is not set. I thi...
03 Feb 2014
- 17:52 Feature #446 (Resolved): Repair broken Genetic minimizer after we get rid from ROOT dependency
- 16:01 Feature #543 (Sprint): Review release script
- 15:27 Refactoring #581 (Archived): Check naming of the coherence length
- Check the naming of the coherence length in the source code.
- 09:37 Refactoring #538 (Resolved): Implementation of a consistent order of variables for all form factors
30 Jan 2014
- 16:11 Bug #191 (Rejected): Gui: improve performance of TQtWidget in the case of CONT4Z option
I drop this issue since there is more fundamental problem connected with Qt5 and ROOT.- 16:08 Testing #561 (Resolved): Implement MathFunctions unit test
- 16:08 Bug #220 (Resolved): Gui: provide GUI compilation under Qt5/linux
I was not able to solve ROOT/Qt5 problem. Instead, I have implemented new scientific graphics from qcustomplot li...- 15:04 Feature #491 (Rejected): Provide https access to git repository
- For access to a read-only git:// repository, the user needs to have port 9418 open, which is commonly blocked by corp...
- 14:57 Feature #304 (Resolved): Provide compilation of HipGISAXS and run test simulation on GPU
- Compilation of hipgisaxs turned out to present some difficulties. The steps for compiling in linux gcc 4.8 with CUDA ...
- 14:55 Feature #304 (Sprint): Provide compilation of HipGISAXS and run test simulation on GPU
29 Jan 2014
- 11:16 Refactoring #168 (Rejected): Create class to hold Experiment, SimulationParameters and ISample
- This issue has been resolved during a previous refactoring.
Simulation holds Experiment, Sample and SimulationParame... - 11:12 Feature #318 (Sprint): Implement beam divergence and wavelength distribution
- 11:10 Feature #513 (Rejected): Composition of transformations
- Already implemented in the refactoring of transformations
- 10:57 Testing #557 (Resolved): Implement OutputData<Eigen::Matrix2d> unit test
28 Jan 2014
- 15:11 Feature #571 (Resolved): Replace real Bessel with complex one where needed
- 11:48 Bug #578 (Archived): Initialization problem in LLData class
- There is an unhandled exception when it tries to call getTotalSum() for LLData initialized with Eigen matrix.
Fi...
27 Jan 2014
24 Jan 2014
- 20:31 Bug #567 (Resolved): Restore PythonAPI generation under Maverick
The problem is with MacPort's gccxml which is now doesn't work with new Mac's clang.
Fortunately (so far) solu...- 17:27 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
- test for LLData<Eigen::Matrix2d> is done. OutputData<Eigen::Matrix2d> will be completed by next day.
- 16:23 Testing #557: Implement OutputData<Eigen::Matrix2d> unit test
- LLData<Eigen::Matrix2d>()->getTotalSum() throws an Exception.
Findings:
In LLData.h(line#217), T result = 0 was a...
23 Jan 2014
- 19:43 Feature #446 (Sprint): Repair broken Genetic minimizer after we get rid from ROOT dependency
- 15:04 Feature #482 (Resolved): Implement/review Full spheroid formfactor
- 15:04 Feature #484 (Resolved): Implement/review Ellipsoid formfactor
- 15:04 Feature #485 (Resolved): Implement/review Anisotropic hemi-spheroid formfactor
- 15:04 Feature #486 (Resolved): Implement/review Spheroid formfactor
- 14:58 Support #577 (Archived): Implement form factor of truncated cubes
- This feature has been requested by Chang-Yong Kim
from Hard X-ray MicroAnalysis Beamline
http://exshare.lightsou...
22 Jan 2014
- 17:30 Testing #556 (Resolved): Implement HomogeneousMaterial and HomogeneousMagneticMaterials unit tests
- 17:29 Testing #559 (Resolved): Implement SpecularMatrix unit test
- Not sure about the functionality. I invoked all public functions. Need to check.
- 17:27 Testing #564 (Resolved): Implement ScalarSpecularInfoMap and MatrixSpecularInfoMap test
- 16:30 Testing #563 (Resolved): Revise Beam unit test
- 12:42 Bug #576 (Archived): Fix functional tests under Maverick
- 12:36 Testing #562 (Resolved): Implement MatrixRTCoefficients unit test
21 Jan 2014
- 17:59 Bug #574 (Rejected): Implement check of FFTW version
- The compilation crashes in the middle, if obsolete fftw2 is present on the system instead of fftw3
- 17:50 Feature #553 (Resolved): Provide interface to perform off-specular scattering simulations
- 16:51 Testing #573 (Resolved): Implement DWBASimulation unit test
- 11:46 Testing #573 (Sprint): Implement DWBASimulation unit test
- 11:46 Testing #573 (Archived): Implement DWBASimulation unit test
- 15:46 Testing #560 (Resolved): Implement ScalarRTCoefficients unit test
17 Jan 2014
- 09:50 Feature #571 (Archived): Replace real Bessel with complex one where needed
- e.g. FormFactorCylinder
- 09:43 Feature #569 (Resolved): Provide complex Bessel functions in C++ by wrapping existing fortran code
New complex bessel functions (modification of C. Bond code from http://www.crbond.com/math.htm) are implemented.
...
13 Jan 2014
- 18:08 Feature #569 (Sprint): Provide complex Bessel functions in C++ by wrapping existing fortran code
- 10:50 Feature #569 (Archived): Provide complex Bessel functions in C++ by wrapping existing fortran code
- 17:16 Feature #521 (Resolved): Implement polarized DWBA with cylindrical particles functional test
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