Activity
From 21 Sep 2015 to 20 Oct 2015
20 Oct 2015
- 18:04 Revision fada7650: Remove explicit usage of double_epsilon in IAxis classes
- 17:57 Revision 84864a1f: LLData<T> operator/=: corrected bad usage of double_epsilon
- 17:56 Revision 8d1dcc9d: Removed commented code
- 17:46 Feature #1148 (Backlog): MacOS: provide generation of dmg installer using Qt5.5
- 17:46 Feature #1149 (Backlog): MacOS: provide Maverick compilation using MacMini and vagrant
- 17:46 Configuration #1150 (Backlog): Improve release script procedure
- 17:46 Feature #1180 (Backlog): GUI: refactor material editor to make select/cancel behavior less confusing
- 17:46 Feature #1139 (Backlog): Py: Provide Simulation class with possibility to set vector of Simulatio...
- 17:34 Bug #1216 (Archived): GUI: normalization of intensity
- intensity is not normalized, so also beam intensity doesn't influence scattering intensity
- 17:26 Feature #1120 (Backlog): Calculate the specular peak intensity: |R|^2 at the specular pixel
- 17:23 Revision 42d87c3d: Removed normalize from FitObject
- 17:19 Revision 87939899: Remove obsolete code in IFormFactorBorn
- 16:59 Revision 671e5751: Merge branch 'MesoScript' into develop
- 16:58 Revision 9908e42f: Update in TestRoughness to generate plot for presentation
- 16:43 Revision 7114c7d7: Fix relative error calculations in different classes
- 15:25 Revision cf9288ea: Fixed relative error calculation in Numeric namespace
- 11:16 Revision 753b36a9: "Attempt to pull info from sample model"
- 10:57 Revision e73a80d1: Fixed usage of double_epsilon in ISquaredFunction
- 10:26 Bug #1198 (Resolved): GUI: fix simulation for particle distributions and negative z coordinate
- 10:26 Revision 8a2651ba: Merge branch 'negzdistr' into develop
- 10:25 Bug #1215 (Archived): Repair wrong usage of double_epsilon in Core
- 10:22 Revision 17c41123: Remove limits for DistributionItem's properties (like mean)
19 Oct 2015
- 13:03 Feature #1214 (Backlog): Core: roughness: add real-space visualization
Just move the code from App/TestRoughness.cpp (FFT method) on board of LayerRoughness.- 11:20 Revision 72aba834: Fix bug: creation of axes in GUI produces wrong axis names
16 Oct 2015
- 16:20 Revision 67b83434: Fixed exception messages
- 16:17 Feature #1213 (Archived): Implement choice of detector in GUI
- 16:17 Feature #1095 (Resolved): Implement rectangular (real space) detector
- 16:16 Revision 54f0e769: Merge branch 'planedetector' into develop
- 16:11 Revision 1d9ab557: Remove overriding of axis names in IDetector2D::setDetectorAxes
- 16:07 Revision 2901601c: Removed isgisaxs_style parameter from setDetectorParamaters
- 15:39 Revision e67f6f3b: Delegate all default axes creation to IDetector2D (also for IsGISAXS style det...
- 14:38 Revision 6deed2cf: For SphericalDetector, now use as default FixedBinAxis
- 13:52 Revision 9f31f951: Added special detector for IsGISAXS comparison
- 13:23 Revision bfd04787: IDetector2D classes are now able to create the right type of axes themselves (...
- 12:41 Revision bb06d9e1: IDetector2D classes now decide on default axis names
15 Oct 2015
- 17:00 Revision e57685fc: Removed parametrized constructor of Instrument and replaced parameter of setDe...
- 16:41 Revision 60c33341: Added Instrument::setDetectorType
- 16:29 Revision b43f5886: Rename method and provided possibility of initializing Instrument with other t...
- 15:35 Revision 132bce19: Correctly implemented RectangularDetector and RectPixelMap
- 15:23 Revision df1cb44a: Number of lines of code updated
- 11:36 Revision bdf1827e: Regenerated Python API
- 11:20 Revision aff58e56: Added prototype RectangularDetector
- 09:54 Revision 64fabc87: FitObject temporaraly runs simulation normalize.
- 09:32 Bug #1212 (Archived): Windows: modify installer to prepend BornAgain location to system PATH inst...
I have just discovered the user, who has 3 versions of Bornagain (1.0, 1.1 and 1.3) installed on Windows 7.
Seems ...
14 Oct 2015
- 17:29 Revision 0e4b717f: Rename 'Detector' to 'SphericalDetector'
- 16:38 Revision 2412496f: Fix failing GUISuite functional tests
- 15:30 Revision a398914f: Replaced fixed Detector class in Instrument with smart pointer to interface ID...
13 Oct 2015
- 16:14 Revision 2553f59a: Added clone() method for IDetector2D and subclasses
- 12:40 Revision c03be0d7: Remove knowledge of specific subclass of IPixelMap from all objects, except De...
- 12:40 Revision 04f6580f: Rename private member field
- 12:40 Revision 7034822e: Moved generic functionality of 2D detectors in interface IDetector2D
- 12:40 Revision 05a148a4: Regenerated Python API; fixed unit test
- 12:40 Revision 3f9daa32: Removed unused parameters alpha_bin and phi_bin in IFormFactor::evaluatePol
- 12:40 Revision 8256f578: Added class WavevectorInfo to hold all information needed for form factor calc...
- 12:40 Revision 990f0080: Added comment
- 12:40 Revision 6705ac76: Replace parameter of IFormFactor::evaluate with WavevectorInfo
- 12:40 Revision 2d132f65: Extracted WavevectorInfo into its own header file
- 12:40 Revision 3d823873: WavevectorInfo: made members private
- 12:40 Revision 2825cccc: Replace parameter of IFormFactor::evaluatePol with WavevectorInfo
- 12:40 Revision 7aed94b4: Only use a single k_f value inside the evaluation of form factors (not two lim...
- 12:40 Revision 3a308afb: Cleanup of IInterferenceFunctionStrategy::evaluate
- 12:40 Revision 5726a4a8: Provided conversion from kvector_t to cvector_t; forced use of getMeanQ() in I...
- 12:40 Revision 805febd1: Fixed bug from previous commit
- 12:40 Revision 47875e02: Removed alpha/phi min/max from SimulationElement
- 12:40 Revision 31c9958f: Use consistent value of k_f for R,T coefficients and form factor calculations
- 12:40 Revision 0ac8b9fb: Move generation of SimulationElement vector to Detector
- 12:40 Revision bc981797: Added AngularPixelMap
- 12:40 Revision 57161f28: Code cleanup
- 12:40 Revision d3634570: Include IPixelMap inside SimulationElement
- 12:40 Revision 303d5b21: Remove default constructor of SimulationElement
- 12:40 Revision 1594ebab: Move calculation of integration factor out of IInterferenceFunctionStrategy (m...
- 12:40 Revision 4b01debb: Code cleanup
- 12:40 Revision 16b659ad: Use kvector for interference functions (no complex vector needed, since only t...
- 12:40 Revision 6ee91168: Temporary implementation for SimulationElement::getMeanKF()
- 12:40 Revision d294be69: Removed unused parameter alpha_bin in IFormFactor::evaluate
- 12:39 Revision 9f929422: Removed obsolete IFormFactorBornSeparable
- 12:39 Revision 9d234b93: Added IPixelMap as an interface for integrating over a pixel
- 11:27 Refactoring #1064 (Resolved): Get rid of "pylab" in Python scripts
- 11:27 Documentation #1182 (Resolved): Drupal: provide fitting example with simultaneous fit of two data...
- 11:26 Revision 7e608009: Merge branch 'TwoDatasetsFit' into develop
- 11:26 Revision 1e22c671: Samll fixes in python fitting examples
12 Oct 2015
- 16:35 Revision 53c3ea2d: Getting rid from pylab in demo scripts
- 15:40 Revision 85fe4c75: All python/simulation examples are switched to pyplot
- 14:59 Revision a3bd353b: Rename private member field
- 14:56 Revision faa0dc6d: More comments on fitting examples.
- 14:37 Revision f6ccd633: Fitting with scale and background example restored.
- 14:32 Revision ca598e6a: Remove knowledge of specific subclass of IPixelMap from all objects, except De...
- 13:51 Revision a46eb551: Use consistent value of k_f for R,T coefficients and form factor calculations
- 13:50 Revision 73caaeda: New example for simultaneous fit of two datasets
- 10:38 Revision 865c576f: Compiler warnings under MacOS addressed
- 09:47 Feature #1211 (Archived): Switch to C++-11 for the whole project
Since Qt is going to c++-11 in forthcoming 5.6, it is about the time to do the same
* modify CMake machinery app...- 09:30 Revision 8e9a3dec: Attemp to safely import matplotlib
09 Oct 2015
- 16:35 Revision e0ea3544: Removed alpha/phi min/max from SimulationElement
- 16:29 Documentation #1181 (Resolved): Drupal: provide fitting example along slices
- 16:28 Revision 3be8d110: Relocation of fit examples
- 16:19 Revision 625ee72b: Merge branch 'FitWithMasks' into develop
- 16:19 Revision 165aed83: FitAlongSlices example finally.
- 15:36 Revision 2d122ca6: New NumpyUtils to return vector of doubles as Numpy array
- 15:33 Revision 65f59b6e: Fixed bug from previous commit
- 13:58 Revision b7ccc515: Provided conversion from kvector_t to cvector_t; forced use of getMeanQ() in I...
- 11:33 Bug #1210 (Rejected): GSLLMA minimizer sometimes doesn't respect fit parameter limits attribute
In FitSpheresInHexLattice_builder.py example setting of minimizer to...- 10:50 Revision 5307c20e: Summation of two histograms, all tests are working
- 10:07 Revision f6ccbbbb: Some beautification in FitStrategies print out.
- 10:07 Bug #811 (Rejected): FitSuite's PrintObserver reports wrong number of iterations for multiple str...
- So what, it's just a feature. Rejecting...
08 Oct 2015
- 18:29 Revision 0a8d6376: Fit strategy adjust minimizer repaired, example is working.
- 17:01 Revision 998405e0: Cleanup of IInterferenceFunctionStrategy::evaluate
- 16:53 Revision 64697950: Only use a single k_f value inside the evaluation of form factors (not two lim...
- 15:58 Revision 10a1efb0: FitWithMasks example repaired
- 15:51 Revision 9420fa71: Two fit examples fixed
- 14:50 Revision fbc0047b: Renaming in IntensityDataiOFactory
- 14:17 Revision f81896aa: Replace parameter of IFormFactor::evaluatePol with WavevectorInfo
- 14:00 Revision b24acbc7: WavevectorInfo: made members private
- 11:42 Revision 6fd2ed5d: Extracted WavevectorInfo into its own header file
- 11:32 Revision d4fd5870: Replace parameter of IFormFactor::evaluate with WavevectorInfo
- 10:50 Revision 91cb8daf: Compilation fix for MacOS
06 Oct 2015
- 10:28 Support #1199 (Rejected): Consider implementation of partial structure factor
Suggestion from Marvin Berlinghof
And I have some feature recommendations:
Are you thinking about enabling part...- 10:25 Bug #1198 (Archived): GUI: fix simulation for particle distributions and negative z coordinate
From Marvin Berlinghof
I think I found a small bug in the GUI:
if you have buried particles in a layer, let's s...
02 Oct 2015
- 18:10 Revision 3695a87b: Improvement on histogram/FitSuite interface, most of functional tests are work...
- 14:06 Revision e945c61a: New convenience methods in Histograms to get min,max over bin content
- 11:41 Revision b230db50: GIASSimulation now able to return IHistogram
01 Oct 2015
- 16:19 Revision 62dc1b46: Added comment
- 16:18 Revision 8004db1a: Added class WavevectorInfo to hold all information needed for form factor calc...
- 15:58 Refactoring #1064: Get rid of "pylab" in Python scripts
I take this, it fits refactoring I'm doing now in python examples (related to the IntensityData and Fitting API cha...- 15:56 Feature #1099 (Resolved): Repair fitting with masks
- 15:55 Revision 19e900f0: Cleanup in ChiSquaredModule
- 15:18 Revision b0d17ca1: Code cleanup in FitKernel
- 15:02 Revision 1dfe7109: Removed unused parameters alpha_bin and phi_bin in IFormFactor::evaluatePol
- 14:33 Revision ce8b8fc9: Removed unused parameter alpha_bin in IFormFactor::evaluate
- 14:19 Revision 09b67ba1: Refactoring in IObserver's
- 14:14 Revision f6c5121e: Temporary implementation for SimulationElement::getMeanKF()
- 11:44 Revision 47d7b6f8: Fitting functionality is splitted between FitKernel (machinery) and FitSuite (...
- 09:36 Revision 2671b502: Before starting deep FitSuite refactoring
30 Sep 2015
- 17:55 Revision 4a107563: Obsolete code removed from FitSuiteObjects
- 17:22 Revision 1c25e2ba: Use kvector for interference functions (no complex vector needed, since only t...
- 17:08 Revision 27eaa6bb: FitObject refactored to get rid from ChiSquared module
- 16:15 Revision 1b7cf8d0: Code cleanup
- 15:59 Revision 714007cc: Refactoring in FitObjects
- 15:41 Revision e1860224: Move calculation of integration factor out of IInterferenceFunctionStrategy (m...
- 14:46 Revision a684c8e0: Remove default constructor of SimulationElement
- 14:30 Revision 6769893d: Include IPixelMap inside SimulationElement
- 14:30 Revision 0d2bd817: Code cleanup
- 14:14 Revision 4e910cc2: Added AngularPixelMap
- 13:48 Revision ee40da93: Move generation of SimulationElement vector to Detector
- 13:04 Revision cd26e767: First working version of Gradient minimizers with new FitElement.
- 11:31 Revision c88f0c48: Added IPixelMap as an interface for integrating over a pixel
- 11:09 Revision ea3154c8: Removed obsolete IFormFactorBornSeparable
- 11:09 Revision 101bb638: typedef is moved out of anonymous namespace to treat compilation error under o...
- 11:09 Revision 4e7ffbca: Missed include for our picky build server
- 10:58 Revision 27f99c4f: Missed include for our picky build server
- 10:50 Revision 16eb391e: typedef is moved out of anonymous namespace to treat compilation error under o...
- 10:47 Revision 16dfd44a: Vector of FitElement is introduced with the idea to refactor ChiSquaredModule
29 Sep 2015
- 20:13 Revision abe8ed74: On the way to refactoring FitSuite
- 14:24 Revision c87b779e: Removed obsolete IFormFactorBornSeparable
- 13:42 Revision e8d6a11c: Updates in PythonAPI
- 13:35 Revision 7f6a635c: Merge branch 'FitWithMasks' into develop
- Conflicts:
Core/PythonAPI/src/PythonModule.cpp - 13:33 Revision 51529b7b: FitStrategyAdjustData is abandoned and removed
- 13:25 Revision f168e309: Masks are propagated in ChiSquared module
- 12:32 Revision 4fd1a3db: SimulationElement reverted to old implementation (no index on board).
- 11:05 Revision b97c1020: PythonAPI for masks now is working
28 Sep 2015
- 17:21 Revision 176713dd: Masks are added to the detector
- 14:48 Revision caf6c2af: Vertical and horizontal line masks
- 14:31 Revision 1e7462f1: Line mask and unit tests.
- 13:22 Revision e33ea2a1: Ellipse shape and unit tests.
- 12:33 Revision d26d4677: Rectangle mask and tests
- 11:19 Revision 04ff90e6: New constructor for polygon shape and tests.
- 10:50 Revision 4be76d29: DetectorMask unit tests
25 Sep 2015
- 16:31 Revision 1e0f36b7: First implementation of the detector mask
- 14:13 Feature #1184 (Backlog): Implement transformation to q-space for intensity image
- A possibility would be to plot lines of constant qy/qz on top of the planar detector image
- 13:50 Revision 0aad0c95: 2D polygon shape and corresponding unit tests.
- 13:20 Bug #1083 (Resolved): Trivial MultiLayer samples (no roughness, no particles) cause simulation cr...
- 13:08 Revision dab661f9: Merge branch 'mlemptybug' into develop
- 13:08 Revision e09863f4: Fix bug: empty multilayer (no roughness or particles) should also simulate (bu...
- 12:48 Bug #1173 (Resolved): Revise ParticleDistribution base class
- 12:47 Revision 722451de: Merge branch 'partdist' into develop
- 12:47 Revision a1866bf8: Regenerate python API
- 11:40 Revision 90292729: Moved ParticleDistribution to IAbstractParticle
24 Sep 2015
- 17:34 Refactoring #619 (Resolved): Masked simulation doesn't use all threads all the time
Was easy to fix with SimulationElement and first masking implementation- 17:28 Revision 120aac55: Merge branch 'DetectorMask' into develop
- 17:27 Revision 75b8edf3: First implementation of masking in GISASSimulation (naive but working)
- 16:36 Revision c6b92470: Changes in OutputData to compare shapes of mixed type objects.
23 Sep 2015
- 18:02 Revision e4076cc5: Yet another convenience function for OutputData, and tests
- 17:55 Bug #1136 (Resolved): Numerical instability at phi_f=0 on MacOS for Pyramid based form factors
- 17:43 Revision c8ed7568: Fix sign error and removed insignificant term
- 17:14 Revision c08c3904: Merge branch 'pyramidff' into develop
- 17:13 Revision 79825ae7: Updates formulas of (anisotropic) pyramid form factor in user manual
- 16:37 Revision e951e224: DetectorParameters class are removed to simplify detector creation
- 14:58 Feature #922 (Resolved): Add slicing to IntensityDataFunctions
- Added inside Histogram1D and 2D
- 14:57 Revision 65939633: Update in performance file
- 14:49 Feature #948 (Resolved): Implement new IntensityData object with improved usability
Two new classes are available: Histogram1D and Histogram2D. See code examples
Suggestions on API are welcome.
...- 14:42 Revision 4d7e702c: Merge branch 'IntensityDataObject' into develop
- 14:42 Revision 484e9ae3: Fix in functional test to correct for rot90 array
- 14:38 Revision 285b0aa1: Removed rot90 from all user examples
- 14:14 Revision 3d11b212: Additional methods for histograms to find global bins, unit tests.
- 13:16 Revision f0e3b548: Refactoring in Histogram 1D and 2D api
- 11:30 Revision ff87d490: Implemented singular cases for anisotropic pyramid form factor
22 Sep 2015
- 18:01 Revision c79ac395: Array rotation by 90. degrees in OutputData.getArray
- 16:22 Revision 7ec53f9b: Replaced reference file with more accurate one for anisotropic pyramid
- 15:57 Revision 23bca2bb: Refactor anisotropic pyramid form factor (general case)
- 14:07 Revision 0a38d7c3: More unit tests for histograms
- 09:36 Revision 7652138e: FormFactorAnisoPyramid: added initialization checks
21 Sep 2015
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