Activity

From 13 Jan 2016 to 11 Feb 2016

11 Feb 2016

17:32 Refactoring #1334 (Archived): Core: remove ProgramOptions from the simulation

* mainly to get rid from this boost dependency in core
* Also simplify the way we assign number of threads, and mc...
pospelov
15:15 Refactoring #1333 (Sprint): MSC switches hopefully obsolete
I will do it together with migration to MSVC 2015. I would like to try community edition. pospelov
14:48 Refactoring #1333 (Archived): MSC switches hopefully obsolete
---
BA_CORE_API_ inline bool isnan(double x)
{
#ifdef _MSC_VER
return _isnan(x);
#else
...
wuttke
10:23 Refactoring #1332 (Rejected): replace Boost.Atomic by C++11 <atomic>
http://theboostcpplibraries.com/boost.atomic says: »If your development environment supports C++11, you don’t need Bo... wuttke

10 Feb 2016

20:15 Feature #1289 (In Progress): == Instrument (beam, resolution, detector) ==
wuttke
20:14 Feature #1287 (In Progress): == Particle form factors ==
wuttke
20:13 Feature #964 (In Progress): === GUI ===
wuttke
20:13 Feature #861 (In Progress): === Website & Examples ===
wuttke
20:12 Envelope task #424 (In Progress): === PythonAPI ===
wuttke
20:12 Feature #418 (In Progress): === Configuration & Build ===
wuttke
20:12 Feature #284 (In Progress): === Fit ===
wuttke
20:12 Refactoring #1331 (Resolved): regenerate Python bindings after moving declaration of cvector_t, k...
Currently, Types.h declares quite different things.
It can be split quite naturally into Tools/Types.h with declarat...
wuttke
20:11 Feature #1290 (In Progress): === Core: framework ===
wuttke
20:01 Bug #1299: gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9
Installed gccxml etc from the indicated sources. Compiles under Debian/stable. Running codegenerator.py fails with er... wuttke
16:34 Feature #1245 (Sprint): Investigate alternative Python API generation (for c++11)
pospelov
16:33 Refactoring #1258 (Sprint): GUI: move XML related methods outside of the SessionModel
pospelov
16:30 Refactoring #1291 (Sprint): core functional test machinery: simplify, or at least explain
pospelov
16:29 Feature #1184 (Resolved): Implement transformation to q-space for intensity image
pospelov
16:29 Feature #1184 (Sprint): Implement transformation to q-space for intensity image
Actually we have implemented this in GUI as a simple axes transformation. OK for now. pospelov
16:27 Refactoring #1295 (Sprint): remove 'inc/ and 'src/' directory level
pospelov
16:27 Refactoring #1296 (Sprint): update internal information about performance tests
pospelov
16:26 Feature #1275 (Resolved): Provide rectangle detector examples and functional tests
finally pospelov
16:25 Refactoring #409 (Backlog): Core: remove duplicate functions "evaluate" and "evaluatePol"
pospelov
16:24 Feature #1019: Extend GUI ParticleDistribution with linked parameters
10 month old already... Moving again to next sprint pospelov
16:23 Documentation #1141 (Backlog): Manual: describe multi layers
pospelov
16:23 Documentation #1135 (Backlog): Manual: describe core shell particles
pospelov
16:23 Documentation #1014 (Backlog): Parameterization: document simulation with distributed parameters
pospelov

08 Feb 2016

17:54 Documentation #1309 (Resolved): Copy&Paste error on website
herck
17:42 Documentation #1309 (Resolved): Copy&Paste error on website
On
http://www.bornagainproject.org/node/105
replace line 49:
Create and return off-specular simulation with beam a...
sbusch
15:27 Bug #1293 (Backlog): bold math symbols broken under Texlive2015
herck
14:32 Feature #1213 (Resolved): Implement choice of detector in GUI
pospelov
10:31 Feature #1308 (Rejected): GUI: take care about margins in ColorMapPlot

Currently margins surrounding IntensityDataItem color map plot are auto-margins. It means that while zooming in, th...
pospelov
09:33 Feature #1126 (Sprint): GUI: improve performance of IntensityDataWidget while dragging colorbar
pospelov
09:26 Feature #335 (Sprint): Check Python 3 compatibility
pospelov
09:26 Feature #31 (Sprint): Core: beam propagation: Implement x-ray polarization factor
pospelov
09:23 Configuration #1255 (Sprint): MacOS: provide vagrant build configurations for Mavericks
pospelov
09:23 Feature #1281 (Sprint): GUI: provide widget for fit parameters settings
pospelov
09:22 Bug #1113 (Sprint): GUI: python script view is not updating while selecting different multilayers
pospelov
09:21 Feature #1180 (Sprint): GUI: refactor material editor to make select/cancel behavior less confusing
pospelov
09:19 Feature #1305 (Sprint): GUI: Make real time simulation aware of current zoom level to speed up th...
pospelov

05 Feb 2016

15:07 Feature #1305 (Rejected): GUI: Make real time simulation aware of current zoom level to speed up ...

The idea is the following:
* User is in Real Time Activity mode tuning parameters. Simulation, naturally, runs i...
pospelov
12:15 Bug #1297 (Resolved): Reading ASCII intensity files not culture invariant
herck

04 Feb 2016

11:21 Refactoring #1304 (Resolved): Unify treatment of numeric constants.
-(1) A constant is not a unit. Constants should be moved from Units.h to a new file Const.h.-
-(2) At a few places...
wuttke

03 Feb 2016

16:18 Bug #1302 (Resolved): Script updates following API change
herck
13:42 Bug #1302 (Sprint): Script updates following API change
herck
14:14 Documentation #1262: Fix IsGISAXS references in form factor section
(Walter:) All the form factors related to the pyramid have been reimplemented, meaning the formula's do no longer cor... wuttke
14:02 Bug #1303 (Resolved): Functional test montecarlo_integration.py fails
herck
13:42 Bug #1303 (Sprint): Functional test montecarlo_integration.py fails
herck
10:26 Bug #1303 (Archived): Functional test montecarlo_integration.py fails
Failure has been observed on both, debian jessie and mac os x.
$ make check:
The following tests FAILED:
63 - ...
ganeva
13:42 Bug #1274 (Sprint): GUI: rotated ellipse in MaskEditor is wrongly propagated to domain
herck
13:42 Bug #1297 (Sprint): Reading ASCII intensity files not culture invariant
herck
09:12 Bug #1299: gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9
Since Py++, gccxml, pygccxml packages are not supported any more, I would assume that Debian repository contains obso... pospelov
08:45 Refactoring #1295: remove 'inc/ and 'src/' directory level
I have taken the liberty to change tracker category from "Bug" to "Refactoring".
* to have smaller number of "stil...
pospelov

02 Feb 2016

19:41 Bug #1302 (Archived): Script updates following API change
This concerns scripts in
Doc/UserManual/fig/ff2
wuttke
19:24 Refactoring #1300 (Resolved): more stable computation of Prism6 formfactor
resolved in commit cedb98a wuttke
19:20 Refactoring #1300 (Resolved): more stable computation of Prism6 formfactor
rederive analytical expression to avoid apparent singularities;
reimplement and validate;
describe in manual.
wuttke
18:34 Bug #1298 (Resolved): Mac os x: BornAgain.app crashes (cannot load the QtNetwork library)
pospelov
17:08 Bug #1298 (Sprint): Mac os x: BornAgain.app crashes (cannot load the QtNetwork library)
pospelov
16:43 Bug #1298 (Archived): Mac os x: BornAgain.app crashes (cannot load the QtNetwork library)
the error message is:
-----------
Dyld Error Message:
Library not loaded: @rpath/QtNetwork.framework/Version...
ganeva
17:12 Bug #1299: gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9
wuttke wrote:
> fails - with different error messages under stable (jessie) and testing (stretch)
How did you ins...
pospelov
16:49 Bug #1299 (Rejected): gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9
fails - with different error messages under stable (jessie) and testing (stretch) wuttke
15:49 Bug #1297 (Archived): Reading ASCII intensity files not culture invariant
strtod respects locale format, should be made invariant
Otherwise our intensity data files are loaded wrongly on Ger...
david
15:39 Feature #1283: Provide functional test for all formfactors, when they are rotated and in the pres...
commit f4fdc974b4
test FormFactorsAbs
source Core/StandardSamples/LayersWithAbsorptionBuilder.cpp
wuttke
15:16 Feature #1283 (Resolved): Provide functional test for all formfactors, when they are rotated and ...
pospelov
15:02 Refactoring #1296 (Archived): update internal information about performance tests
wiki page http://apps.jcns.fz-juelich.de/redmine/projects/bornagain/wiki/Performance_test seems outdated.
-What is...
wuttke
14:46 Refactoring #1295 (Archived): remove 'inc/ and 'src/' directory level
For IDE user it doesn't matter, but for command-line folk this extra directory level is annoying.
Furthermore, cur...
wuttke
14:27 Bug #1294 (Archived): provide substantial unit tests for factor computations
Current UnitTests/TestCore/FormFactorTest.h tests mostly trivalities (does get<Param> return <Param> as set in the co... wuttke
14:22 Bug #1293 (Resolved): bold math symbols broken under Texlive2015
In our manual, we are using the unicode-math package under @xelatex@ to get ISO-style bold italic math symbols. This ... wuttke
14:15 Bug #1292 (Resolved): BornAgain does not build on mac os x (unittest SpecialFunctionsTest.csinc f...
hopefully resolved in develop/9320d89bf (eps relaxed to 4.7e-16) wuttke
13:47 Bug #1292 (Resolved): BornAgain does not build on mac os x (unittest SpecialFunctionsTest.csinc f...
Fails SpecialFunctionsTest.csinc unittest during the BornAgain compilation.
The error message:
================...
ganeva
11:55 Refactoring #409: Core: remove duplicate functions "evaluate" and "evaluatePol"
Needs discussion. Later optimization could go exactly in the opposite direction. - Joachim wuttke
11:47 Refactoring #1291 (Resolved): core functional test machinery: simplify, or at least explain
I find it hard if not impossible to understand the functional test machinery.
It's already somewhat tricky at CMak...
wuttke
11:39 Feature #1290 (Rejected): === Core: framework ===
Permanent parent tasks. wuttke
11:29 Testing #412 (Resolved): Unit and functional tests campaign
Campaign successfully terminated.
From now on, testing tasks should be children of thematic parent tasks.
wuttke
11:27 Testing #412 (Sprint): Unit and functional tests campaign
wuttke
11:22 Feature #1289 (Rejected): == Instrument (beam, resolution, detector) ==
Parent issues for tasks related to detector geometry wuttke
11:11 Feature #720 (Long Term Idea): Provide OpenMPI support in FitSuite
wuttke
11:04 Bug #1288 (Resolved): BornAgain does not compile on mac os x (problem with constexpr ... sqrt)
Indeed, sqrt is non-constexpr according to the standard, though it is tolerate by g++.
Fixed in develop/650f42d
wuttke
10:54 Bug #1288 (Resolved): BornAgain does not compile on mac os x (problem with constexpr ... sqrt)
The error is caused by FormFactorTetrahedron.cpp:
The compiler information:
================
-- The C compil...
ganeva
10:53 Feature #1287 (Rejected): == Particle form factors ==
wuttke
10:24 Documentation #1104: don't use version-dependent URLs in the online docs
Currently, our Drupal pages contain links to version-dependent file names like BornAgainManual-1.4.0.pdf or BornAgain... wuttke
09:22 Refactoring #1286 (Rejected): don't include each core .h file in each .pypp.cpp file
This makes recompilation so slow. wuttke
09:15 Refactoring #1285 (Resolved): Investigate status of Py++
The problem: Py++ is almost orphaned, and slowly getting outdated. For instance, the C++ code it generates contains a... wuttke
08:48 Feature #1075 (Sprint): Cone6 form factor -> analytic
wuttke

01 Feb 2016

16:40 Feature #1045 (Resolved): Use interference funtion's properties to set total particle surface den...
herck

25 Jan 2016

13:02 Refactoring #1284 (Rejected): Move particle surface density to interference function instead of p...
Logically, this density belongs to the interference function herck
09:12 Feature #1283 (Archived): Provide functional test for all formfactors, when they are rotated and ...

In the view of possibly approaching form factor refactoring, we need a way to immediately detect all expected conse...
pospelov

22 Jan 2016

20:05 Documentation #1282 (Rejected): Drupal: unique form of persistent page URLs
All web pages should have persistent URL's of the same form.
Currently, http://bornagainproject.org/node/47 coexists...
wuttke
13:53 Feature #1281 (Archived): GUI: provide widget for fit parameters settings
pospelov
13:52 Feature #1272 (Resolved): GUI: provide run of the fitting in GUI thread
pospelov

20 Jan 2016

16:08 Documentation #1280 (Archived): draw tetrahedron as seen from -x
wuttke
16:07 Documentation #1279 (Archived): Inkscape tasks
wuttke

15 Jan 2016

15:53 Feature #1035 (Resolved): Revise IFormFactor::getRadius and IFormFactor::getHeight
Removed getHeight() (not needed)
Removed setters for length, width, height, etc.
Made getRadius() pure virtual, so ...
herck
15:00 Bug #1276 (Resolved): Fix thread concurrency while repoorting progress update in DWBASimulattion
pospelov
15:00 Bug #1276 (Sprint): Fix thread concurrency while repoorting progress update in DWBASimulattion
pospelov
14:56 Feature #1259 (Resolved): Add 1D lattice interference function to GUI
pospelov

14 Jan 2016

16:57 Feature #1259: Add 1D lattice interference function to GUI
Only the icon for a 1D lattice interference function has to be created and added to the GUI herck
10:17 Refactoring #1264 (Rejected): Refactor ParameterizedItem's different naming schemes
Duplicate of #1270 herck

13 Jan 2016

18:07 Refactoring #1268 (Resolved): Change phi angle convention
herck
14:23 Refactoring #1278 (Resolved): Deprecated declarations by compiling on new systems
The only remaining warnings concern ThirdParty folder or PythonAPI folder, which are not under direct control. herck
10:15 Refactoring #1278 (Sprint): Deprecated declarations by compiling on new systems
herck
10:04 Refactoring #1278 (Archived): Deprecated declarations by compiling on new systems
Compiling on new systems (debian sid, ubuntu wily) produces a lot of warnings on deprecated declarations. For example... ganeva
 

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