Activity

From 03 Feb 2016 to 03 Mar 2016

03 Mar 2016

15:38 Documentation #1359 (Resolved): Provide wiki page on .int.gz reference files: Info moved to http://apps.jcns.fz-juelich.de/redmine/projects/bornagain/wiki/Validation_against_reference_data wuttke
11:14 Documentation #1359: Provide wiki page on .int.gz reference files: *.int format is BornAgain internal ASCII format, which contains detector axes definition and 2D intensity map. You ... pospelov
15:32 Bug #1364 (Rejected): Problems with infinite form factors: There are no infinite form factors anymore herck
15:28 Bug #1364 (Rejected): Problems with infinite form factors: * Monte Carlo integration over bins is not compatible with infinite form factors
* Infinite shapes can only be corre... wuttke
15:09 Feature #335 (Resolved): Check Python 3 compatibility: has become part of #1245 wuttke
15:07 Support #852: Make GUI available at JCNS servers: Installation request sent to sysadmin. wuttke
14:58 Support #852: Make GUI available at JCNS servers: Collect knowledge at http://apps.jcns.fz-juelich.de/doku/sc/intern:roll_out_at_jcns_and_mlz wuttke
14:39 Support #852: Make GUI available at JCNS servers: Currently on Juelich servers there is BornAgain-1.0.0 installed. The main stopper is the absence of qt5. I'll investi... wuttke
14:07 Support #852: Make GUI available at JCNS servers: This issue is a bizarre one. Is the BornAgain GUI still unavailable on the JCNS cluster? If yes, then this issue shou... wuttke
14:22 Feature #12: Core: SLD: Calculation of refractive index for x-rays and neutrons from database: Waiting for release of NSXTools wuttke
14:17 Feature #1256: CMake should notify the user during the build if there is already previous version...: it's Unix specific, right? wuttke
13:56 Feature #1363 (Rejected): == Unix build ==: wuttke
13:56 Feature #1362 (Rejected): == Mac build ==: wuttke
13:56 Feature #1361 (Rejected): == Win build ==: wuttke
13:54 Refactoring #1285 (Resolved): Investigate status of Py++: everything done in task #1245 wuttke
13:53 Feature #1245: Investigate alternative Python API generation (for c++11): When new solution is stable, then please update or replace the wiki page http://apps.jcns.fz-juelich.de/redmine/proje... wuttke
13:49 Refactoring #1258 (Resolved): GUI: move XML related methods outside of the SessionModel: pospelov
13:44 Refactoring #1353 (Resolved): GUI: refactor AwesomePropertyEditor to rely on new GUI model: pospelov
13:40 Refactoring #1357: to discuss: authorship and file headers: Wait for discussions at ILL/PSI. wuttke
13:28 Documentation #1360 (Resolved): reequilibrate hierarchy levels in online docs: Current structure of online docs is:... wuttke
13:25 Testing #1345 (Resolved): Vagrant: Provide Win10 Vagrant box running on build server: Created a bare Windows 10 pro virtual machine, packaged it with vagrant and added the box. See dokuwiki for more details herck

02 Mar 2016

17:15 Feature #1245: Investigate alternative Python API generation (for c++11): boost::python is now completely eliminated from the code. SWIG bindings now incorporate doxygen comments automatically. jmfisher
13:35 Bug #1293 (Backlog): bold math symbols broken under Texlive2015: I'll finish this when I'm back home. Not needed for sprint31 though. wuttke
13:33 Documentation #1262 (Backlog): Fix IsGISAXS references in form factor section: will do this along with other form factor work; no need to have this in sprint31 wuttke
13:33 Feature #1075 (Backlog): Cone6 form factor -> analytic: progress slowly; no need to have this in sprint31 wuttke
13:31 Bug #1358 (Resolved): for complex vector3D, functions mag() and mag2() should return a real, not ...: resolved in 196185 with corrections (Python API regeneration) in 37419ca wuttke
09:52 Documentation #1359: Provide wiki page on .int.gz reference files: Add some hints in the BornAgain wiki about the reference files: What format they are, where they are taken from and w... wuttke

01 Mar 2016

21:18 Documentation #1359 (Resolved): Provide wiki page on .int.gz reference files: wuttke
19:17 Bug #1358 (Archived): for complex vector3D, functions mag() and mag2() should return a real, not ...: wuttke
09:58 Feature #1245: Investigate alternative Python API generation (for c++11): cmake script now defaults to Python 2.7, unless BORNAGAIN_USE_PYTHON3 is defined TRUE, in which case it will look for... jmfisher

29 Feb 2016

09:58 Refactoring #1357 (Resolved): to discuss: authorship and file headers: How shall our file headers evolve over the years?
Currently we have:
// *****************************************... wuttke

28 Feb 2016

08:39 Bug #1293 (Sprint): bold math symbols broken under Texlive2015: Solution at https://github.com/wspr/unicode-math/issues/340.
Implemented in b420ec8.
TODO: test under unicode-math-0.8 wuttke

25 Feb 2016

14:21 Feature #1245: Investigate alternative Python API generation (for c++11): "swig-bindings" branch now uses Python 3. It should be backwards compatible with Python 2.7, but this hasn't been ful... jmfisher

24 Feb 2016

14:47 Feature #1245: Investigate alternative Python API generation (for c++11): Latest commit to branch "swig-bindings" now has 100% success rate for 'make check', using SWIG-generated bindings. Th... jmfisher

22 Feb 2016

13:30 Bug #1293: bold math symbols broken under Texlive2015: reported as "unicode-math bug 340":https://github.com/wspr/unicode-math/issues/340 wuttke

21 Feb 2016

19:31 Bug #1293: bold math symbols broken under Texlive2015: Reported as "Debian bug 815467":http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=815467. wuttke

19 Feb 2016

16:32 Refactoring #1353 (Archived): GUI: refactor AwesomePropertyEditor to rely on new GUI model: pospelov
16:32 Refactoring #1352 (Archived): GUI: refactor SessionModel and ParameterizedItem: Global refactoring of underlying GUI model.
* everything will be an item
* get rid of properties
* get rid of su... pospelov
16:27 Feature #1281 (Resolved): GUI: provide widget for fit parameters settings: pospelov
13:54 Documentation #1351 (Archived): Drupal: update installation instructions, tutorials for coming re...: * Mention in MacOS installation instructions minimal anaconda version
> More precisely, it must be minimal numpy v... pospelov
13:46 Configuration #1350 (Archived): Buildbot: provide set of configurations for buildbot-based BornAg...: We have to agree on minimal set of builds for BornAgain and setup them.
Possible collection
* Two Ubuntu LTS re... pospelov
13:38 Feature #1349 (Rejected): Buildbot: provide tutorial how to add new build configuration: Linux: For the moment the knowledge mostly in Jan's hands, we need good tutorial on BornAgain redmine wiki, so everybody cou... pospelov
13:37 Configuration #1348 (Rejected): Buildbot: install agent on scgmini and attach Mavericks/Yosemite/...: To have finally automatic production and validation of dmg installers. pospelov
13:36 Testing #1347 (Archived): Winbuild: Provide compilation of BornAgain in MSVC 2015 Comunity editio...: The goal is to create working environment (and step-by-step instruction how to set-up it) to be able to compile Bor... pospelov
13:33 Testing #1346 (Archived): Winbuild: Provide GSL/Cmake based compilation uder MSVC 2015: To be able to compile BornAgain under 64bit windows in MSVC2015 environment and to not to depend from obsolete MSVC/g... pospelov
13:31 Testing #1345 (Archived): Vagrant: Provide Win10 Vagrant box running on build server: Make available rdesktop login from our linux desktops pospelov
13:30 Configuration #1344 (Archived): MacOS: install buildslave to macmini: * Install buildslave directly to macmini (i.e. no vagrant involved) to test El Capitain builds.
* Provide build co... pospelov
13:28 Bug #1343 (Archived): GUI: online update notifier is not working: * At least it didn't notice update from 1.5.0 to 1.5.1 (version of patch is not taken into account?)
* Also it wou... pospelov

18 Feb 2016

17:30 Feature #1342 (Archived): GUI: add Monte-Carlo integration option in the simulation: pospelov
15:33 Bug #1338 (Resolved): Crash while saving certain project file: Put in hotfix-1.5.1 herck
15:20 Bug #1341 (Resolved): GUI crashes if simulating with 1D lattice interference function: herck
15:20 Bug #1341: GUI crashes if simulating with 1D lattice interference function: Will be put to hotfix-1.5.1 herck
15:08 Bug #1341 (Resolved): GUI crashes if simulating with 1D lattice interference function: herck

17 Feb 2016

17:15 Feature #1245: Investigate alternative Python API generation (for c++11): Created new branch "swig-bindings" off 1.5 release, replacing Py++ by SWIG. Functional tests are at 98% pass, with on... jmfisher
10:21 Bug #1338 (Archived): Crash while saving certain project file: From Celine:
Please find enclosed a project which crashes BornAgain each time I want to save it.
The sample is no... pospelov

16 Feb 2016

15:18 Feature #1187 (Sprint): Implement 1D fitting in SpecularSimulation: herck
15:17 Feature #1120 (Sprint): Calculate the specular peak intensity: |R|^2 at the specular pixel: herck

15 Feb 2016

17:43 Feature #1185 (Rejected): GUI: implement Q-space detector in GUI: We have now trivial implementation for axes units in Q, let's wait with this unless we have some concrete request. Re... pospelov
17:40 Bug #1078 (Rejected): Adjust size of projections from IntensityData widget to the size of ColorMa...: there is similar issue, rejecting pospelov
16:01 Documentation #1261 (Archived): Drupal: update installation instructions, tutorials for coming re...: pospelov
15:15 Documentation #1261 (Resolved): Drupal: update installation instructions, tutorials for coming re...: pospelov
16:01 Bug #1302 (Archived): Script updates following API change: pospelov
16:01 Bug #1303 (Archived): Functional test montecarlo_integration.py fails: pospelov
16:01 Feature #1283 (Archived): Provide functional test for all formfactors, when they are rotated and ...: pospelov
16:01 Feature #1184 (Archived): Implement transformation to q-space for intensity image: pospelov
16:01 Feature #1275 (Archived): Provide rectangle detector examples and functional tests: pospelov
16:01 Bug #1297 (Archived): Reading ASCII intensity files not culture invariant: pospelov
16:01 Bug #1298 (Archived): Mac os x: BornAgain.app crashes (cannot load the QtNetwork library): pospelov
16:01 Feature #1267 (Archived): GUI: implement update online notification widget: pospelov
16:01 Refactoring #1268 (Archived): Change phi angle convention: pospelov
16:01 Feature #1272 (Archived): GUI: provide run of the fitting in GUI thread: pospelov
16:01 Bug #1276 (Archived): Fix thread concurrency while repoorting progress update in DWBASimulattion: pospelov
16:01 Refactoring #1278 (Archived): Deprecated declarations by compiling on new systems: pospelov
16:01 Refactoring #1270 (Archived): Clarify and refactor different naming properties of ParameterizedItem: pospelov
16:01 Feature #1259 (Archived): Add 1D lattice interference function to GUI: pospelov
16:01 Feature #1260 (Archived): Windows: installer should create PYTHONPATH environment variable in sys...: pospelov
16:01 Refactoring #1265 (Archived): Refactor RectangularDetector API to correspond with the tutorial: pospelov
16:01 Feature #1266 (Archived): GUI: Implement collapsable Accordion widget: pospelov
16:01 Feature #1233 (Archived): GUI mask editor: provide transform from C++ domain to python domain: pospelov
16:01 Feature #1234 (Archived): GUI mask editor: provide functional tests for all 3 domains: pospelov
16:01 Feature #1235 (Archived): GUI mask editor: integrate IntensityData widget into GraphicsScene: pospelov
16:01 Refactoring #1236 (Archived): Clean up remote git branches: pospelov
16:01 Refactoring #1237 (Archived): GUI: generate distributed parameter names from GUI sample model ins...: pospelov
16:01 Feature #1246 (Archived): Investigate refactoring of ParameterizedItem structure: pospelov
16:01 Feature #1149 (Archived): MacOS: provide Maverick compilation using MacMini and vagrant: pospelov
16:01 Feature #1211 (Archived): Switch to C++-11 for the whole project: pospelov
16:01 Feature #1230 (Archived): GUI mask editor: implement mask editor basic functionality: pospelov
16:01 Feature #1231 (Archived): GUI mask editor: integrate mask editor into InstrumentView: pospelov
16:01 Feature #1232 (Archived): GUI mask editor: provide transform from C++ domain to GUI domain: pospelov
16:01 Feature #1213 (Archived): Implement choice of detector in GUI: pospelov
16:01 Feature #1035 (Archived): Revise IFormFactor::getRadius and IFormFactor::getHeight: pospelov
16:01 Feature #1045 (Archived): Use interference funtion's properties to set total particle surface den...: pospelov
16:01 Refactoring #1061 (Archived): describe or remove morphology mode: pospelov
16:01 Feature #1148 (Archived): MacOS: provide generation of dmg installer using Qt5.5: pospelov
15:37 Refactoring #1286 (Rejected): don't include each core .h file in each .pypp.cpp file: We are going to SWIG pospelov
15:36 Refactoring #1332 (Rejected): replace Boost.Atomic by C++11 <atomic>: We are not using boost::atomic. pospelov
15:35 Bug #1299 (Rejected): gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9: Due to the progress demonstrated by Jonathan, seems that we are moving toward SWIG. No need in this option any more. pospelov
15:34 Refactoring #1331 (Resolved): regenerate Python bindings after moving declaration of cvector_t, k...: pospelov
13:34 Bug #1336 (Resolved): GUI: fix "Settings" menu bar on MacOSX: pospelov

12 Feb 2016

18:23 Bug #1336 (Resolved): GUI: fix "Settings" menu bar on MacOSX: MacOSX native menu bar thinks that he is smart. Find the way to add our custom "Settings" menus to it. pospelov

11 Feb 2016

17:32 Refactoring #1334 (Archived): Core: remove ProgramOptions from the simulation: * mainly to get rid from this boost dependency in core
* Also simplify the way we assign number of threads, and mc... pospelov
15:15 Refactoring #1333 (Sprint): MSC switches hopefully obsolete: I will do it together with migration to MSVC 2015. I would like to try community edition. pospelov
14:48 Refactoring #1333 (Archived): MSC switches hopefully obsolete: ---
BA_CORE_API_ inline bool isnan(double x)
{
#ifdef _MSC_VER
return _isnan(x);
#else
... wuttke
10:23 Refactoring #1332 (Rejected): replace Boost.Atomic by C++11 <atomic>: http://theboostcpplibraries.com/boost.atomic says: »If your development environment supports C++11, you don’t need Bo... wuttke

04 Feb 2016

11:21 Refactoring #1304 (Resolved): Unify treatment of numeric constants.: -(1) A constant is not a unit. Constants should be moved from Units.h to a new file Const.h.-
-(2) At a few places... wuttke

03 Feb 2016

16:18 Bug #1302 (Resolved): Script updates following API change: herck
13:42 Bug #1302 (Sprint): Script updates following API change: herck
14:14 Documentation #1262: Fix IsGISAXS references in form factor section: (Walter:) All the form factors related to the pyramid have been reimplemented, meaning the formula's do no longer cor... wuttke
14:02 Bug #1303 (Resolved): Functional test montecarlo_integration.py fails: herck
13:42 Bug #1303 (Sprint): Functional test montecarlo_integration.py fails: herck
10:26 Bug #1303 (Archived): Functional test montecarlo_integration.py fails: Failure has been observed on both, debian jessie and mac os x.
$ make check:
The following tests FAILED:
63 - ... ganeva
13:42 Bug #1274 (Sprint): GUI: rotated ellipse in MaskEditor is wrongly propagated to domain: herck
13:42 Bug #1297 (Sprint): Reading ASCII intensity files not culture invariant: herck
09:12 Bug #1299: gccxml does not compile under gcc5; codegenaror.py does not work under gcc4.9: Since Py++, gccxml, pygccxml packages are not supported any more, I would assume that Debian repository contains obso... pospelov
08:45 Refactoring #1295: remove 'inc/ and 'src/' directory level: I have taken the liberty to change tracker category from "Bug" to "Refactoring".
* to have smaller number of "stil... pospelov

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