Activity
From 30 Mar 2016 to 28 Apr 2016
28 Apr 2016
- 18:38 Revision b585f624: Merge branch 'fftests' of apps.jcns.fz-juelich.de:BornAgain into fftests
- 18:37 Revision ba3f7cdf: now searching discrepancy at level 1e-8 ...
- 16:24 Revision d2daa49e: Toggling for job list view is implemented
- 15:57 Revision 4fd09978: Job activity selector is moved from toolbar to status bar
- 15:50 Refactoring #1424 (Archived): reduce verbosity of googletest output
- http://stackoverflow.com/questions/36847322/
- 15:02 Revision 501fe63d: Repair bug in prism ff with symmetry S2.
- 14:45 Revision 2e7ca60d: Two new docks in JobView for messages and fit activity.
- 13:25 Revision 761c44af: Refactored order of widgets initialization in mainwindow/JobView
- 12:00 Bug #1423 (Resolved): == eliminate warnings ==
- We should aim for zero warnings from the standard build process.
Current warnings
* From third-party C++ code => ... - 11:29 Documentation #875 (Archived): Provide content for http://gisaxs.com
- 11:28 Documentation #875 (Resolved): Provide content for http://gisaxs.com
- 11:28 Documentation #875 (Sprint): Provide content for http://gisaxs.com
- 11:05 Revision 712bd124: Merge branch 'FitParametersWidget' into develop
- 11:05 Revision 1fe2fcd4: mainwindow is back to default state
- 10:23 Documentation #987 (Rejected): Tidy up the gisas/theory directory
- not a task to be done at once, but work in progress
- 10:15 Documentation #1262 (Resolved): Fix IsGISAXS references in form factor section
- Done in 0871f28. Hopefully, it's now clear where our computation deviates from IsGISAXS.
- 10:14 Revision 0871f288: Unify note on F(q) in Manual; review History section (but change little). This...
27 Apr 2016
- 17:47 Revision ecef314e: FitSuiteItem and Co for FitParametersWidget
- 17:47 Revision 1eea68d3: New FitParameterModel to adopt FitParameterItem for 5 columns trees
- 17:47 Revision 2bd4eb38: On the way to implement context menu for ModelTuningWidget
- 17:47 Revision 4c243f34: Add tuning parameter to fit parameter implemented
- 17:47 Revision 41385ead: Protection from repetitive adding of the same tuning parameter as fit parameter
- 17:47 Revision 6785e627: Possibility to remove link from fit parameters
- 17:47 Revision 052ba03a: Add link to existing fit parameter
- 17:47 Revision 151dc39c: Attempt to make cross-selection between fit items
- 17:47 Revision 0c46e5df: FitModel renamed to ObsoleteFitModel
- 17:47 Revision d6c51c13: FitView renamed to ObsoleteFitView
- 17:47 Revision b6d8c41b: FitSettings, RunFit and ImportData widgets renamed to Obsolete*
- 17:47 Revision 9a405b56: The rest of fit items which will be refactored, renamed to obsoleteItems.
- 17:47 Revision 9f0a6968: New playground for fit widgets testing
- 16:35 Revision 5b2b1833: Derivation of sphere ff now in manual.
- 15:45 Revision 71f9cfa5: Add link to existing fit parameter
- 15:03 Revision 409cfd18: Possibility to remove link from fit parameters
- 14:11 Revision 60707e86: Protection from repetitive adding of the same tuning parameter as fit parameter
- 13:41 Bug #1417 (Resolved): numeric inaccuracies in form factors
- Anisopyramid reimplemented using polyhedral ff; sym_S2 in Pyramid disabled until resolution of #1420
- 13:37 Refactoring #1422 (Resolved): provide clue when test fails
- * when reference test fails, indicate location of old and new image
* when python test fails, provide a clue what to... - 11:24 Revision e39fbc8d: correct argument of J_0 in cylinder FF derivation
- 11:14 Revision 6bbdebd9: Add tuning parameter to fit parameter implemented
- 10:23 Revision 2dd4e94a: Merge branch 'fftests' into develop: Improved tests, reimplemented AnisoPyramid.
- 10:15 Revision c29a3dfe: adjust q ranges in tests; add comments and references to open issues
- 09:09 Revision 6d0894ff: extend range for series expansion in FormFactorFullSphere => now passes string...
- 09:00 Revision 9cb61810: AnisoPyramid reimplemented using Polyhedron.
- Updates SpecializationTests.
BROKEN: BasicTest. - 08:46 Bug #1420: Symmetry S2 not usable
- wrong results, therefore disabled in Prism6 and Pyramid
- 08:13 Revision 090877dd: Merge branch 'fftests' into develop: Corrected FullSphere FF,
- which wrongly yielded 0 for very small q.
- 08:12 Revision f7076816: Update reference data involving FF FullSphere: has improved
26 Apr 2016
- 20:54 Revision 0e47b749: Derivation of cylinder form factor: so simple it can be made.
- 18:14 Revision 4399f3e6: On the way to implement context menu for ModelTuningWidget
- 17:41 Feature #975 (Backlog): man page should be built at release time
- 17:40 Documentation #1262 (Sprint): Fix IsGISAXS references in form factor section
- 17:39 Refactoring #1065 (Sprint): Revise particle form factors: change names, add few form factors, cha...
- agreed since long that this should be part of the next API-breaking sprint
- 17:25 Revision 9af3f276: New FitParameterModel to adopt FitParameterItem for 5 columns trees
- 17:20 Feature #1415 (Backlog): onChange() should invalidate cache, and not immediately execute precompu...
- 16:42 Bug #1421 (Resolved): FullSphere F(q)=0 for small q
- Done in c3568ef.
- 12:50 Bug #1421 (Resolved): FullSphere F(q)=0 for small q
- runff 1 0 11 1 0 0 0 0 0 1e-7 => (4.15786325694,0)
runff 1 0 11 1 0 0 0 0 0 1e-8 => (0,0) - 16:41 Revision c3568eff: Repaired FormFactorFullSphere.
- Rearranged formula. At this occasion, switched to series expansion for qR<5e-5.
- 14:24 Revision 5957c577: FitSuiteItem and Co for FitParametersWidget
- 12:48 Bug #1420 (Resolved): Symmetry S2 not usable
- therefore the symmetry is not used until this is resolved
- 12:46 Bug #1294 (Resolved): provide substantial unit tests for factor computations
- Done in 6b09bc4.
We are now testing:
* whether F(0)=V
* continuity (comparing F(q) for small q with F(0))
* sym... - 12:43 Revision 6b09bc43: Merge branch 'fftests' into develop: Form factor tests.
- This closes issue 1294 (provide substantial tests for form factors).
We are now testing:
- whether F(0)=V
- symmetry ... - 12:36 Revision 552ef9c9: sort directories
- 11:41 Revision a3d85f9a: start new test program in ad-hoc/JWu to investigate freshly discovered problems
- 10:10 Revision 1edd8082: correct notation, and temporarily switch off sym_S2, which solves the problem ...
- 09:54 Revision 639d5a20: Specialization test on Prism6 also fails.
- 09:45 Revision bf9f620b: Implemented small-q test in FormFactorBasicTest;
- not ready fro merge because severe errors were detected in three form factors.
25 Apr 2016
- 21:24 Revision 6bb1feeb: more symmetry tests. Prism6 detects considerable inaccuracy
- 19:41 Revision 330ccddd: outcommented attempts to reduce noise
- 17:47 Revision 82e0bab5: start symmetry tests
- 17:39 Revision 469ebd53: utility file for q looping rewritten, and moved to UnitTests/utilities
- 17:18 Revision 68cf935f: Separate functionality within QLoopedTests
- 16:57 Revision e9428dcd: Let Google do the looping
- 16:53 Revision a07770cc: New playground for fit widgets testing
- 16:10 Revision 6e00cf0c: Move generation of q values for tests to qGenerator.h
- 16:06 Refactoring #1419 (Archived): move test code out of core
- qGenerator.h has been provisionally packed in Core/StandardSamples.
If I see correctly, this directory contains much... - 15:03 Bug #1294: provide substantial unit tests for factor computations
- Specialization tests implemented.
More tests needed. - 15:02 Refactoring #1418 (Resolved): provide cotangent, and replace division by tan(alpha) in pyramids
- somehow 1/tan(pi/2) works, but we should not rely on it
- 15:00 Revision 0ce89f3b: prism tests: work in spite of division by tan(pi/2).
- 14:30 Revision 9688be58: document issue with q-range restricted form factors
- 14:25 Revision eecdb3bb: corrections
- 13:28 Revision 0211f997: Polyhedral topology is now const static.
- This will allow us to procompute diameter (= characteristic length scale)
before creating polyhedral faces. - 11:12 Revision 667b04a4: Dismantle special treatment of true pyramids: this shall be implemented in a m...
- 10:55 Revision 24b96b17: new specialization test: pyramid4
- 10:51 Bug #1417 (Resolved): numeric inaccuracies in form factors
- * According to FormFactorSpecializationTest:
** Pyramid and AnisoPyramid agree only for moderate values of |q|.
* -... - 10:06 Revision 91d743b1: no more constructor calls PolyhedralFace(..) with empty vertex list
- 09:09 Bug #1416 (Waiting): form factors with numeric integration fail for small and for large q
- * For small q: inaccurate results, as demonstrated by TruncatedSphere vs FullSphere in FormFactorSpecializationTests....
- 09:02 Revision 7a37f8fa: nontrivial form factor test: does truncated sphere with H=2R agree with full s...
- 06:57 Revision ab3024c6: Merge branch 'fftests' into develop:
- Unit tests now handled by module UnitTests.cmake.
Core tests splitted in several directories, to allow parallel compi...
24 Apr 2016
- 19:37 Revision d15a61a2: minor edits in long unit test sources
- 19:18 Revision e74c236a: Test fixture for MultiLayerTest.h
- 08:07 Revision 8c570c8e: Improve comments in autogenerated gtest files.
23 Apr 2016
- 19:13 Revision 461e92ab: move template files out of UnitTests.cmake
- 18:31 Revision 48f8930b: New module UnitTests.cmake, handling UnitsTests subdirectories Core and Fit.
- 18:09 Revision cf6d116c: UnitTest/Core split in several subdirectories to allow parallel make
- 08:41 Revision d27e6e4a: Most of CMakeLists goes into function UNIT_TEST_DIRECTORY
- 07:56 Revision 5f412ba4: List of #include's for main.cpp now autogenerated by CMake.
- Furthermore, gtest.h included only in main.cpp, not in every single test (=> only tiny speed gain).
22 Apr 2016
- 18:01 Revision 48b38cd5: repetetive tests -> function clone_test
- 16:10 Revision f42b59b6: Revert "Re-enable unicode-math package"
- This reverts commit 0c23b53a3f1a94c3e91c0b9518cf8d049617f1d0.
- 16:03 Revision 18024cea: Add small absorptive component when eigenvalue in polarized Parratt formalism ...
- 16:03 Revision 7c734443: Small corrections
- 16:03 Revision efe49256: Added particle type to normalized perturbation potential and swapped two parti...
- 16:03 Revision 841c7f9a: Minor corrections and removed redundant T-R decoupling approximation
- 16:03 Revision cfe05c10: Small changes to definitions and formulas for interference function
- 16:03 Revision 8720e1f6: Added one- and two-dimensional lattice interference function to documentation
- 16:03 Revision 101aba98: Copied subsection to be modified for one dimensional paracrystal
- 16:03 Revision 99658a84: Documented one-dimensional and radial paracrystal interference function
- 16:03 Revision f032ead6: Added two-dimensional paracrystal description to user manual
- 16:03 Revision 8ada51e6: Changed notation in two-dimensional lattice interference function documentation
- 16:03 Revision 03eb6da0: Added reference to used formalism and small correction
- 16:03 Revision fbdb2b9c: Re-enable \iffalse to remove old documentation
- 16:00 Revision 0c23b53a: Re-enable unicode-math package
- 16:00 Revision 449ecfb4: Uncomment old parts of text and replace old macro's by new ones
- 16:00 Revision c6534a82: Minor corrections
- 16:00 Revision 2e2cf9ce: Additional general expression for particle flux and correction for case when k...
- 16:00 Revision 505d38e6: Provided appropriate way of dealing with k_\perp becoming zero in BornAgain (d...
- 16:00 Revision d0299e12: Corrected treatment of k_\perp is zero for top layer of multilayer and impleme...
- 16:00 Revision e1b0ac03: Added comment to clarify why amplitudes need to vanish for a multilayer when t...
- 15:17 Bug #1371 (Waiting): presence of some boost components not checked by cmake
- 14:21 Feature #1415 (Sprint): onChange() should invalidate cache, and not immediately execute precompute()
- on advise by Walter, we go for option 1:
* each thread has it's own copy of sample parts, so threading will not be a... - 11:27 Feature #1415 (Rfc): onChange() should invalidate cache, and not immediately execute precompute()
- 09:17 Feature #1415 (Backlog): onChange() should invalidate cache, and not immediately execute precompu...
- This is not only for elegance, but improves functionality: Currently, an exception is thrown whenever one parameter i...
- 13:08 Documentation #1102 (Backlog): review normalization, especially in view of finite sample extensio...
- 13:01 Revision 970f72bb: The rest of fit items which will be refactored, renamed to obsoleteItems.
- 11:37 Revision cb33eadd: FitSettings, RunFit and ImportData widgets renamed to Obsolete*
- 11:36 Refactoring #1410 (Resolved): rename GCCXML_SKIP_THIS
- Resolved in d163e2e.
- 11:28 Refactoring #1410: rename GCCXML_SKIP_THIS
- no, only the name is obsolete
- 11:35 Revision d163e2ed: Replaced GCCXML_SKIP_THIS by SWIG. This resolves #1410.
- 11:22 Revision 22399faa: FitView renamed to ObsoleteFitView
- 11:17 Revision 1efd1543: FitModel renamed to ObsoleteFitModel
- 10:52 Revision 8fa327cf: Merge branch 'fftests' into develop: Several minor repairs and improvements;
- renamed UnitTests/ subdirectories; not yet worked on the form factor tests.
- 10:50 Revision 795c6632: repaired FitParameterLinkedTest (however, addMatchedParametersFromPool is curr...
21 Apr 2016
- 19:19 Revision 8221c3ee: Restore RealParameterWrapperTest.h, with RealParameterWrapper part of an IPara...
- 18:36 Revision 0bcd4e19: update CMakeLists (App has gone)
- 18:32 Revision 3444c38b: Checked Bessel function outcome against online calculator, and removed 'TODO' ...
- 18:32 Revision e0561c4a: shorter directory names under UnitTests/
- 18:28 Documentation #1400 (Sprint): blender: paint dodecahedron and icosahedron
- I put it in the sprint, and when later assign to myself when in the 'blender' mood.
- 18:27 Bug #1411 (Rejected): FindGSL version test fails under cmake-3.0 => BornAgain does not build on D...
- Should be fixed by now.
- 18:26 Bug #1404 (Resolved): compilation broken for libgsl2
- I have updated minimizers and removed check for GSL version. It compiles with 1.16 and 2.1 without any additional cma...
- 18:06 Revision c3caf8dd: Merge branch 'FixGSL2' into develop
- 18:05 Revision 5d7cb455: Removed requirement on GSL version, should compile with 1.16 and 2.1
- 17:59 Bug #1294 (Sprint): provide substantial unit tests for factor computations
- first, repair broken tests related to parameter pool
- 17:56 Support #852: Make GUI available at JCNS servers
- Not worth the fight - wait unless we have user contact
- 17:55 Bug #1413 (Resolved): polyhedra won't react to ex-post parameter variation
- Solved in 5f3e7a72: things are now precomputed upon parameter change. Broken tests will be restored under issue #1294.
- 17:42 Revision 5f3e7a72: Merge branch 'precompute' into develop:
- - Form factors of polyhedron and polygonal prism now compute vertex positions etc
upon call of onChange().
- Parame... - 17:42 Revision cf3bf76f: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 17:41 Revision 3a496e9b: Moved call of onChange() from ParameterPool to RealParameterWrapper.
- 16:57 Documentation #1412: avoid horizontal scrolling in code examples
- two things to do:
* decrease font size by one; determine maximum number of characters per line
* rework examples to... - 15:43 Revision 69dd4c79: Formfactor computation reacts to parameter changes, using precomputation. This...
- Missing tests will be reactivated or written under issue 1294.
- 15:42 Revision 0d7fb801: Updates in ROOT minimizers
- 15:34 Revision c758cfbd: prism3,6 should work, but something is wrong with my ad-hoc test
- 15:02 Revision d2d029cf: Unify parameter names Length, Radius -> BaseEdge
- 14:04 Revision 04a6cbd7: Dodecahedron reacts to parameter change. This almost solves bug 1413. Still TO...
- 12:53 Revision f85ac851: Merge branch 'ModelMapper' into develop
- 12:52 Bug #1370 (Resolved): Fix numerous "features" introduced by latest major GUI refactoring
- With this the GUI "ParameterizedItem" refactoring is over. Old functionality is restored.
* It's not possible to o... - 12:38 Revision ded49472: onChange() implemented in FormFactorDodecahedron; tests for other polyhedra fail
- 12:29 Revision b92a6267: Fixed mouse tracking for ColorMapPlot when switched to projections mode, so st...
- 11:42 Revision cc5f03a5: Gentle way of clearing JobModel to properly notify dependent widgets
- 10:49 Revision 135ca0ac: Fixed bug in RealTime widget (app crashes when remove all jobs from list and t...
- 09:54 Revision 30bea193: Constatness of subscriber in ModelMapper
- 09:37 Revision 85f9bf83: FitKernel is back to unique_ptr for uniformity.
- 09:31 Revision 6171f992: corrections. Now ready for implementing the actual precomputation.
- 08:09 Revision a4967a0e: store debugging version as an example for python introspection: print all meth...
20 Apr 2016
- 23:35 Revision dedbf28a: + test script
- 23:32 Revision 5d3781e8: Implemented onCheck(). setValue(..) no longer returns bool, but throw in case ...
- Replaced another typedef (shared_ptr<ISampleBuilder>).
- 20:58 Revision 94d81ce0: getParameters() and printout functions restored
- 20:38 Revision 3ea0e7e5: ParameterPool now has an attribute IParameterized* m_parent.
- This will allow us to notify the parent about changed parameter values.
Accompanying changes and problems:
- The defa... - 17:57 Revision 095f0084: expand parameter_t (no typedef as alias for lengthy class names, except perhap...
- 15:53 Revision d2c5230a: Celnup in commented code
- 15:37 Revision 78f237c4: All widgets switched to mapper belonging to an item
- 13:54 Revision c6bcf02f: Merge branch 'precompute' into develop - before starting to really work on the...
- 13:01 Revision bcb6aa56: m_fit_kernel -> m_kernel, to unify usage, which differed between the two variants
- 12:56 Revision ebf401ce: Exclude size_t from doxygen collaboration diagrams
- 12:23 Revision a9b11dde: Refactored tests for model mapper.
- 10:24 Revision e31c3686: Unsubscription machinery is implemented for ModelMapper
- 10:16 Revision 773cf3e1: Unify comment style
- 08:56 Revision cb31d50a: IMinimizer: keep catalogue out of interface
- 08:24 Revision 870c3dd0: minor edits, while reading ...
19 Apr 2016
- 23:16 Revision 39084170: minor edits, while reading ...
- 23:14 Revision 7e0c74d4: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 22:00 Revision 118a2328: corrections
- 21:47 Revision 1d692ffa: corr
- 21:44 Revision 481f548a: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 21:43 Revision cae1993e: added AttLimits.cpp (was missing in previous commits)
- 21:24 Revision 637fa1ae: forward class declarations back to top of file, except for TransformFromDomain.h
- 19:18 Revision 95d41c59: rm unused include
- 19:13 Revision 2ac1af67: Merge branch 'precompute' into develop
- 19:11 Revision b1e1ace4: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 19:06 Revision a7d40bf6: Made clear that FitSuite is pointer to implementation FitKernel.
- Removed inclusion of FitKernel.h from FitSuite.
This required one nontrivial change: The pointer-to-implementation
mu... - 18:17 Revision c668c692: Comments in FitKernel.h
- 18:07 Revision 786620f1: Comments, rm unused getSTLvector, prepare for removal of include FitKernel fro...
- 17:13 Revision 83db45d1: Set of standard signals added to ModelMapper
- 16:35 Revision 035eeac2: More accurate ModelMapper usage accross all QWidget's
- 15:47 Revision db1b24c0: Merge branch 'GUIFixes5' into develop
- 15:44 Revision 3805b439: Protection in ModelMapper to stop signaling if own item is deleted
- 15:06 Revision 4e76318b: Correct technical language: .h headers do not »define«, they »declare«
- 15:00 Revision 0ae004c4: improve comments
- 14:20 Revision d4522f1f: minor changes; add Doxyfile.long
- 14:04 Revision 67b7e754: Message service restored, minimal supported project version introduced.
- 13:42 Revision bc59df88: correct doxygen entry @file (rm inc/, src/)
- 13:36 Revision 572eeb56: simplify parameter registration
- 12:20 Support #852: Make GUI available at JCNS servers
- Answer from Josef Heinen 29mar16:
* BornAgain is installed on the Macs
* This seems not to include the Mac notebo... - 11:34 Documentation #1414 (Backlog): regenerate form factor images in manual
- - in k coordinates
- choose q along more and less directions - 09:51 Revision 0eb179f0: SampleViewAligner repaired
- 09:30 Revision d91e2b6b: Tooltips restored in ComponentEditor
18 Apr 2016
- 20:05 Bug #1413 (Archived): polyhedra won't react to ex-post parameter variation
- needs to be corrected, and test mus be written
- 17:57 Revision 16b3c90c: Modifications in ModelMapper to track onSiblingsChange
- 16:57 Documentation #1412 (Archived): avoid horizontal scrolling in code examples
- Some Python examples have some really long lines.
To read them, one needs to scroll horizontally.
But some examples... - 15:35 Revision 3b50974b: Removed unused GUI code
- 15:30 Revision 5d170b53: GUI unit tests are reenabled
- 15:28 Revision 2ee3c484: Fix in component editors to update on FlagRole change (enable/disable properties)
- 15:15 Revision 0119b2bb: Merge branch 'GUIFixes4' into develop
- 15:15 Revision 2c8ebffa: Fixed group property is finally removed from SessionItem family
- 14:47 Revision 51911926: ditto for Icosahedron
- 14:37 Revision 06490c94: All SessionItems switched to new addGroupProperty method
- 14:32 Revision 537e4f33: Better ff examples for Dodeca
- 13:59 Revision 48876db7: Fixed group property is removed from BeamItem
- 13:39 Revision 7415be8c: Fixed group property is removed from IntensityDataItem
- 13:09 Revision 1d521c28: Fixed group property is removed from RectangularDetectorItem
- 12:54 Revision 1183e752: Fixed group is removed from SphericalDetectorItem
- 12:47 Revision 12f19ad7: remove unused figures
- 12:44 Revision 14d9f254: MaterialItem is refactored to gret rid from FixedGroupProperty
- 12:40 Revision 5e9684d4: rm unused old form factor figures
- 11:39 Revision 8bac253e: ParticleItem's position is refactored to get rid from FixedGroupProperty
- 11:13 Revision 0ac16cf6: pass complex_t by value
- 11:09 Revision 34e19a7e: SessionModel machinery now allows to add items like VectorItem without FixedGr...
- 10:38 Revision c2acb169: bugfix: pass by reference where value is purposedly changed
- 10:24 Bug #1411: FindGSL version test fails under cmake-3.0 => BornAgain does not build on Debian Jessie
- Let's not even attempt to repair the version testing. First resolve 1404, then remove the version testing from FindGSL.
- 09:48 Bug #1411 (Rejected): FindGSL version test fails under cmake-3.0 => BornAgain does not build on D...
- The failure seems to be related to the recent changes in the file cmake/modules/FindGSL.cmake
The error message:
... - 10:11 Revision 5053449d: pass *vector_t by value
- 08:28 Feature #1399 (Resolved): Implement form factors for dodecahedron and icosahedron
17 Apr 2016
- 19:48 Revision 58f4f064: correct cl_lines_of_code.py to handle binary files and commits with no file ch...
- 18:32 Revision b429f7c8: cl_lines_of_code.py now uses git-log --numstat => results deviate from previou...
- 17:04 Revision 6f52a749: further refactoring of cl_lines_of_code.py
- 15:55 Revision 15eb60cb: split FormFactors.h -> ParticleShapes.h
- 15:52 Revision 202615fd: refactoring cl_lines_of_code.py; saving data to table
- 12:44 Revision 32e993cd: explicit handling of true pyramids
- 12:00 Revision f2f7d6e1: polyh_test now covering all implemented polyhedra.
- TODO: special treatment for true pyramids.
16 Apr 2016
- 16:27 Revision 8b75d998: polyh_test works, but why ? the diagnostics should be desactivated !
- 15:57 Revision 89075fde: Polyhedron tests imported from sc-intern
- 15:21 Revision 226a9625: rm unused cbesselJ01. Import setup scripts for dodeca/icosahedron.
- 13:56 Revision f23a41d9: simulated detector image for new form factors -> manual
- 13:29 Feature #1409 (Resolved): accelerate Ripple1
- 12:12 Feature #1409: accelerate Ripple1
- Done in 2dfc525: Straightforward substitution accelerated numeric integral by a factor of 4.
- 12:11 Revision 2dfc5259: Substitution u=acos(z') accelerates numeric integration by factor >4.
- This closes issue 1409.
- 12:05 Refactoring #1410 (Resolved): rename GCCXML_SKIP_THIS
- It's obsolete, right?
- 11:49 Revision 17996864: integrand dimensionless
- 11:43 Revision 0989ed65: shift integration limit
- 11:17 Revision a48dd44b: precompute two factors
- 10:39 Revision 7949d382: correct description of Ripple1 computation
- 09:02 Revision 8c981599: provisional dode&icosa figures now in three locations
15 Apr 2016
- 18:50 Revision c088d209: copy of 32x32 icons was missing
- 17:56 Revision 63ccaee9: document model function used in Ripple1
- 16:57 Feature #1409 (Archived): accelerate Ripple1
- by far the slowest particle form factor - investigate, and possibly accelerate
- 16:52 Refactoring #1217: Cleanup App directory from all obsolete code
- In 6586bdf also deleted unused program options.
- 16:35 Refactoring #1217 (Resolved): Cleanup App directory from all obsolete code
- Done in 7fd9748.
- 16:51 Revision 6586bdf3: rm unused core program options, in further fulfillment of 1217
- 16:34 Revision 7fd9748a: rm -r App. This closes issue 1217.
- 16:31 Revision 0a66faa7: On the way to removing fixed group property
- 15:35 Feature #31 (Backlog): Implement x-ray polarization factor
- still very important, but should not delay the next release
- 15:33 Feature #1399: Implement form factors for dodecahedron and icosahedron
- Fully functional in 68cdd13
- 09:36 Feature #1399: Implement form factors for dodecahedron and icosahedron
- sorry, previous reassigment was in error (was meant for the blender subtask)
- 15:31 Revision 68cdd13b: Merge branch 'platon' into develop
- 15:31 Revision b46a3717: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 15:22 Revision c0658f3d: polyhedron now throws std::runtime_error; planarity test relative to radius_3d
- 15:12 Revision e6d3f8c5: More checks in SessionModel for insertItem failure
- 15:03 Revision 3fb0677f: add dodec&icosahedron to GUI; purge unused 64x64 icons
- 13:47 Revision a718bf63: all tests pass
- 13:22 Revision bbbc7700: Bugfix in groupproperty which was breaking ColorMap color bar.
- 13:11 Revision efceacd0: Helping to MonteCarlo functional test to always pass
- 13:03 Revision 5f60a7aa: + unit tests for new ff's
- 11:36 Revision 754f463a: fixed broken test PySuite/FormFactors
- 10:28 Revision 82705b1b: 2 functional tests still broken
- 10:16 Revision e76d5694: Merge branch 'platon' into develop: new form factors dodecahedron and icosahed...
- 09:57 Revision c6c740cd: regenerate Py bindings under swig 3.0.7
- 09:48 Revision 346a94bf: added FormFactorPolyhedron to swig interface to fix broken bindings
- 09:34 Feature #1238 (Sprint): nicer layout for newsletter@bornagainproject.org (reopened: v1.6.0 round ...
- 08:54 Revision 954ec2d1: regenerated PyAPI, is broken
- 07:39 Revision 314e7b86: temporary log file
14 Apr 2016
- 23:59 Revision cd66e022: .. more do&iso lines, still broken ..
- 23:14 Revision 2608786a: + 4 new reference images
- 18:44 Revision 14a2b4ba: remove abusive unique pointers
- 18:26 Revision d2cb7389: Simplify; improve message from *Suite
- 17:33 Revision 442ff535: dode & icosa ready for functional test
- 17:33 Revision 2ece99e2: Refactoring in NodeEditor to ignore extra mouse button pressed during connecti...
- 17:33 Revision c6657362: New way of notification of ComponentEditor when item changed
- 17:25 Bug #1405 (Resolved): Implementation error in MultiLayerRoughnessDWBASimulation
- 17:23 Revision 1fbd1091: Increased tolerance for Monte Carlo fuctional test
- 17:10 Revision e9425d2a: Fix compilation error
- 17:02 Revision 46866b30: Merge branch 'roughnessbug' into develop
- Conflicts:
GUI/coregui/Models/JobModel.cpp - 16:59 Revision 37697a95: Corrected error in implementation of calculation of diffuse scattering from ro...
- 15:59 Revision 25b285a1: avoid global forward declarations
- 15:53 Feature #1408 (Archived): GUI: refactor/beautify/finalize FitWidget
- For the moment, underlying functionality (model side) is implemented by David. Fitting views are in prototyping state...
- 15:43 Revision 13b6969e: Start implementation of dodecahedron and icosahedron.
- Remove a few unneeded includes.
- 15:07 Feature #1342 (Resolved): GUI: add Monte-Carlo integration option in the simulation
Now it is possible to setup MonteCarlo integration from GUI. Corresponding Core/Python/GUI functional tests (very l...- 14:57 Feature #1138 (Resolved): GUI: provide uniform style for double numbers in GUI-generated Python s...
- Resolved while doing Monte-Carlo in GUI
- 14:56 Feature #1138 (Sprint): GUI: provide uniform style for double numbers in GUI-generated Python script
- 14:54 Revision 32eed917: Merge branch 'GUIMonteCarlo' into develop
- 14:53 Revision f1acac78: New printNm method for python script generation
- 14:12 Revision 8ffc83ae: Uniform style of doubles in Python script generation
- 13:49 Revision c7e366d0: Fine layout tuning in SimulationSetupWidget
- 13:22 Bug #1084 (Resolved): MultiLayer samples with roughness (and without particles) report wrong prog...
- Occasionally fixed it while implementing Monte-Carlo in GUI
- 13:22 Bug #1084 (Sprint): MultiLayer samples with roughness (and without particles) report wrong progre...
- 13:21 Revision 72a9d19e: Fixed progress bar for MultiLayers with roughness simulation
- 12:58 Refactoring #1334 (Resolved): Core: remove ProgramOptions from the simulation
- Occasionally implemented this while doing MonteCarlo in GUI.
- 12:58 Refactoring #1334 (Sprint): Core: remove ProgramOptions from the simulation
- 12:56 Documentation #1400: blender: paint dodecahedron and icosahedron
- To replace placeholder images Dodecahedron3d.png and Icosahedron.png. Thank you, Gennady.
- 12:51 Revision cfa8fe86: New 3-domain functional test for MonteCarlo integration
- 10:55 Revision 3ed20aa2: don't abbreviate "version"
- 10:44 Revision 06cba9c1: Python code generator now handles sim options (number of threads, monte-carlo ...
- 09:39 Revision f6275f5f: TransformToDomain now passes simulation options correctly
13 Apr 2016
- 21:09 Revision f3f08830: rm another remnants of Py++; delete empty lines in libBornAgainCore.i
- 20:08 Revision 0fa14fb9: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 20:08 Revision bee4289c: rm remnants of Py++
- 20:03 Feature #861: === Website & Examples ===
- with the web site quite stable, this is now mostly about examples
- 20:01 Documentation #427 (Rejected): User Examples campaign
- simplify task hierarchy
- 19:56 Revision b5595d66: rm remnant of Py++
- 19:45 Revision acaf1471: rm dev-tools/python-bindings, no longer needed after migration to Swig
- 19:33 Documentation #422 (Rejected): Write page with BornAgain / IsGISAXS comparison
- see comment on #433
- 18:53 Refactoring #1407 (Rejected): rotate the sample, not Q
- Currently, rotation of particles is emulated by rotating Q. In the future, keep Q=ki-kf invariant, and apply rotation...
- 18:36 Documentation #433 (Rejected): Write paragraph with performance comparison IsGISAXS vs FitGISAXS ...
- we'll inevitably come back to this when writing a paper; till then no need to keep it in the tracker
- 18:32 Documentation #991 (In Progress): Revise and reintegrate chapter on particle distributions
- Walter, it seems you are working on this.
- 18:29 Envelope task #1406 (In Progress): == Particle correlations ==
- 18:27 Feature #1032 (Long Term Idea): Rotation of inter-particle structures
- 17:45 Revision 64d50c96: ThreadInfo removed from the Simulation in the favor of SimulationOptions
- 16:54 Revision a87e5480: Simulations are switched to new SimulationOption class
- 15:42 Revision 87e13be2: SimulationOptions renamed to SimulationParameters
- 15:04 Revision f5558260: Multiple compilation warnings undes MacOS fixed
- 14:28 Revision f384b5e5: Python docs regenerated
- 14:26 Revision 045e0efe: even stronger simplification for prismatic face
- 14:23 Revision 94a45ec9: simplified polyhedral face ff: no series expansion if symmetry S2
- 14:20 Revision 93ce6c6a: ProgramOptions is expelled from the Simulation family
- 14:10 Revision 48d42719: Corrected two compilation warnings
- 14:04 Revision bedfaac0: Removed unused variable
- 13:57 Revision ef90c3b7: Added reference to used formalism and small correction
- 13:55 Bug #1405 (Archived): Implementation error in MultiLayerRoughnessDWBASimulation
- get_sum4terms: the q components used are always the top ones (layer 0), instead of the ones appropriate for the inter...
- 13:53 Revision a38b8425: simplify command flow, prepare for special treatment of symmetry S2
- 13:50 Revision 880bff02: JobItem duration sec.msec is added to the list of properties
- 13:15 Revision 47700323: Reimplementation of TruncatedCube finishes conversion to polyhedral form factor.
- 13:00 Revision 5426d579: Fixed names of sample and instrument in JobItem
- 12:42 Revision d7f2682b: Refactoring in PythonScriptWidget to respect constness, refactoring in Simulat...
- 11:36 Revision ffe240c5: Refactoring in SampleValidator; additional constantness accross the GIU models
- 11:33 Revision ba408372: Cuboctahedron reimplemented using generic polyhedron
- 09:31 Revision a0124eda: cleanup fig directory
12 Apr 2016
- 23:30 Revision ff794a3f: Pyramid[4] now implemented using generic polyhedron
- 21:00 Bug #1371 (Backlog): presence of some boost components not checked by cmake
- waiting for clue from upstream ...
- 20:55 Bug #1401 (Resolved): correct inaccurate numerics near removable singularity in form factors Tetr...
- done in 94b795
- 20:54 Revision 94b7959a: reimplemented Prism3 using the generic form factor of a polygonal prism;
- improves the accuracy near q=0.
This closes issue 1401. - 19:09 Revision eb474595: manual updated
- 19:01 Revision 1772fe1c: reimplemented Prism6 using generic PolygonalPrism
- 17:34 Revision af99dab1: Changed notation in two-dimensional lattice interference function documentation
- 17:24 Revision 6e9d6ac8: Cleanup in SimulationSetupWidget and Co after switch to the new SimulationOpti...
- 17:16 Revision 73e3e7f4: Added two-dimensional paracrystal description to user manual
- 16:47 Revision 140fe014: Documented one-dimensional and radial paracrystal interference function
- 16:13 Revision d4631a06: Tetrahedron now using the generic Polyhedron
- 15:46 Bug #1293 (Resolved): bold math symbols broken under Texlive2015
- Works for me. No need right now to test with older unicode-math. And there is even a chance that it would work.
- 15:45 Bug #1293 (Sprint): bold math symbols broken under Texlive2015
- 13:46 Bug #1404: compilation broken for libgsl2
- Per 79fb089, cmake requires GSL 1 EXACT. Revert this once GSL 2 works.
- 13:35 Bug #1404 (Archived): compilation broken for libgsl2
- GSL API change affects ROOT minimizer, see https://sft.its.cern.ch/jira/browse/ROOT-7776. We need to patch our clone,...
- 13:44 Revision 79fb089a: cmake requires GSL version 1 (until issue 1404 is resolved)
- 13:16 Revision bfa11522: patch FindGSL.cmake to prevent error upon second invokation of cmake
- 13:05 Revision dead96fc: Copied subsection to be modified for one dimensional paracrystal
- 12:42 Bug #1403 (Resolved): absence of gsl.h not detected by cmake
- Repaired in 8346ba9be866: imported new version of FindGSL from cmake-3.5. Let's hope it is compatible with older vers...
- 12:41 Bug #1403 (Sprint): absence of gsl.h not detected by cmake
- 08:56 Bug #1403 (Resolved): absence of gsl.h not detected by cmake
- 12:39 Revision 8346ba9b: Replaced FindGSL.cmake by newer version from cmake-3.5.
- This closes issue #1403 (did not terminate upon absence of GSL)
- 09:41 Revision 9aebe480: Merge branch 'cmake' into develop
- 09:37 Revision 397a5896: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 09:26 Revision 0b41b713: cmake files: sort entries, improve comments
- 08:54 Envelope task #1402 (Archived): cmake tasks (OS independent)
11 Apr 2016
- 21:40 Revision 63fb5752: appendix FFCompute has become separate paper
- 21:38 Revision 244cd404: update form factor intro and Cone6 chapter
- 19:00 Bug #1401 (Archived): correct inaccurate numerics near removable singularity in form factors Tetr...
- the problem is evident in the white spot in the reference data Tests/ReferenceData/BornAgain/ref_FormFactors_Truncate...
- 18:50 Feature #1075 (Resolved): Cone6 form factor -> analytic
- Done in d030162b02e, using the generic polyhedron form factor. Got rid of the unphysical singularity in the reference...
- 18:50 Feature #1075 (Sprint): Cone6 form factor -> analytic
- 18:34 Revision 6a0a28ca: Merge branch 'pyramidff' into develop
- 18:33 Revision d030162b: Cone6 now computed using generic polyhedron. Replaced reference by improved one.
- plot_diff script: compute change relative to average of old and new.
- 17:59 Revision 2d373c46: JobItem now uses SimulationOptionsItem to hold all simulation settings
- 17:52 Revision ac6f7064: Added one- and two-dimensional lattice interference function to documentation
- 17:17 Revision 30b446b7: Tooltips added to ComboProperty, first version of SimulationOptionsWidget is i...
- 16:37 Revision 8a5fb6e6: comments, standard typedef
- 16:13 Revision 43d34bd8: imported FormFactorPolyhedron.cpp|h from sc-intern/ff
- 14:56 Revision 729ecf58: SimulationSetupWidget refactoring to switch to ApplicationModels
- 13:52 Revision 11777fbf: Small changes to definitions and formulas for interference function
- 13:21 Revision 98ec798a: Refactoring in PythonScriptWidget to get rid from project manager dependency
- 11:41 Revision 8d16d8f7: Fix in ProjectDocument to not to mark just opened project as 'modified'.
- 11:36 Revision 8e1cfe85: DocumentModel now is saved along with the whole project
- 11:31 Revision bf7f465f: ProjectDocument is switched to ApplicaitonModel insteasd of bunch of separate ...
08 Apr 2016
- 17:35 Revision e00efc0b: New simulationOptionsItem to hold job settings and new DocumentModel to hold c...
- 15:43 Revision 6b388da7: Refactoring in MainWindow
- 15:17 Revision 7ae937ac: New ApplicationModels introduced to hold all models
07 Apr 2016
- 15:17 Revision 06255a5b: Minor corrections and removed redundant T-R decoupling approximation
- 12:07 Documentation #1400 (Archived): blender: paint dodecahedron and icosahedron
- 12:06 Feature #1399 (Resolved): Implement form factors for dodecahedron and icosahedron
- Worthwhile because there are quite many nanoparticles with these shapes.
Feasible thanks to new generic polyhedral f... - 09:31 Revision 60350d56: added swig preprocessor guards for certain overloaded operators due to swig's ...
04 Apr 2016
02 Apr 2016
01 Apr 2016
- 18:06 Revision 41a94f2a: comment
- 17:18 Revision 9c8cc37b: Merge branch 'semicomplexdotproduct' into develop
- 17:17 Revision 9e26c3ec: implemented vector products for mixed arguments (complex/double)
- 17:05 Refactoring #1366: Revise boost libraries usage
- boost::bind and boost::function replaced by their C++11 equivalents
- 15:51 Revision a2382c0e: removed unnecessary lines which were already commented out
- 15:46 Revision c840f590: replaced boost::function with std::function and boost::bind with C++11 lambdas
- 15:27 Revision 46095661: NULL -> nullptr to fix error in windows build
31 Mar 2016
- 11:19 Revision 5ba64b5c: Test of precomputed factorial vs tgamma outcommented because tgamma is too unp...
- 10:57 Revision 723b62d3: Merge branch 'develop' of apps.jcns.fz-juelich.de:BornAgain into develop
- 10:56 Revision 7ca27c3f: increase tolerance in test of factorial vs tgamma; otherwise failure on build ...
30 Mar 2016
- 17:03 Bug #900: Custom form factors in python do not work with multithreading
- This appears to be a consequence of the global interpreter lock in Python, which prevents calls to the Python interpr...
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