Activity

From 09 May 2016 to 07 Jun 2016

07 Jun 2016

18:12 Bug #1452: PySuite tests fail when executed in parallel: For the record: cause of the bug were constant file names (Py script and simulation output) in PyScriptFunctionalTest... wuttke
18:10 Bug #1452 (Resolved): PySuite tests fail when executed in parallel: Solved in [analyfutests 3aee823], soon to be merged into develop. wuttke
17:12 Bug #1455 (Resolved): RuntimeError if CrossCorrLength=0: Fixed in 724fe9f8d2e64f0e8d82013f5f36170a2f7a6351 herck
16:49 Bug #1455 (Archived): RuntimeError if CrossCorrLength=0: BornAgain Python script exits with the "RuntimeError: Attempt to set crossCorrLength to zero" message if the cross co... ganeva
14:32 Refactoring #1454 (Resolved): Export to Python: generated scripts should not require "from bornag...: Automatically generated scripts should teach best practice in BornAgain/Python usage. Therefore:
import bornag... wuttke

06 Jun 2016

10:39 Bug #1452: PySuite tests fail when executed in parallel: I'm investigating .. wuttke
09:54 Bug #1452 (Resolved): PySuite tests fail when executed in parallel: ctest -j4 yields e.g.
The following tests FAILED:
77 - PySuite/FormFactors (Failed)
78 - P... wuttke
07:50 Documentation #1451: update to Drupal 8: Suggested order of upgrade:
* Install drupal locally
** with Bitnami Drupal stack https://bitnami.com/stack/dr... pospelov

03 Jun 2016

15:59 Bug #1449 (Resolved): Apply detector resolution function can give negative results: Negative values arise as a result of the finite precision in the fft's. In special cases, as in the given example, wh... herck
11:15 Bug #1449 (Archived): Apply detector resolution function can give negative results: Reproduce:
use HexCylinders.py from gisas/support/015_AnatolyBerezkin and add the following line to create_simulatio... herck
11:53 Documentation #1437: Release requirement: Update example scripts: Under Drupal 8 (#1451), we might use RESTful services, described at https://drupalize.me/blog/201401/introduction-res... wuttke
11:52 Documentation #1451 (Rejected): update to Drupal 8: especially if we want to use RESTful service to automatize update of Python example scripts, #1437 wuttke
09:24 Bug #1448 (Rejected): Remove html directory from source tarball: * It looks like our current 1.5.1 tarball contains unnecessary 'html' directory with whole content
** Our previous... pospelov
09:22 Configuration #1150 (Sprint): Improve release script procedure: pospelov
08:57 Configuration #1447 (Archived): Migrate to GitHub: * Merging to the develop should be allowed only after successful builds on build server pospelov

02 Jun 2016

00:11 Documentation #1412: avoid horizontal scrolling in code examples: develop 4b2a125 provides tool dev-tools/code-tools/count-line-length.py
wuttke
11:24 Documentation #1412 (In Progress): avoid horizontal scrolling in code examples: Clue from stackexchange: syntaxhighlighter style can be overwritten in our theme's CSS: in
/www/apps/drupal/sites/... wuttke
19:10 Documentation #330: Core: beam propagation: take care of kz=0 case appropriately: no hope that I'll be free for this any soon wuttke
19:08 Envelope task #1402 (Archived): cmake tasks (OS independent): no tasks left open wuttke
14:33 Bug #1070 (Backlog): Unix should install to /usr/local/lib, not to versioned subdirectory: destination_libexec: libexec/ is highly nonstandard; executable should go to bin/ wuttke

01 Jun 2016

22:53 Bug #1439 (Resolved): put PythonAPI under CMake control: Resolved in 95d1a38f. wuttke
10:58 Bug #1439 (Sprint): put PythonAPI under CMake control: I'll try in branch cmake wuttke
10:55 Envelope task #424 (Archived): === PythonAPI ===: no subtasks left open wuttke
10:52 Feature #975 (Resolved): man page should be built at release time: wuttke
10:51 Feature #975 (Sprint): man page should be built at release time: Resolved in 8f51e90. wuttke

31 May 2016

13:56 Documentation #1437: Release requirement: Update example scripts: From https://www.drupal.org/node/811950
> There is very rarely any justification for directly interacting with the d... herck
12:58 Documentation #1437: Release requirement: Update example scripts: There is no simple way to automatize this. We may need to write a script that directly accesses the MySQL data base. wuttke
12:20 Documentation #1282: Drupal: unique form of persistent page URLs: There is a module that auto-generates URLs from titles - but we might prefer shorter names ... wuttke
11:48 Documentation #1282: Drupal: unique form of persistent page URLs: The explicit form is preferred. It can be set under Edit > URL path settings. wuttke
11:47 Bug #900 (Rejected): Custom form factors in python do not work with multithreading: as agreed in meeting wuttke
11:40 Feature #975: man page should be built at release time: Implemented in branch cmake, commit e33ded6da34, except for testing presence of pod2man. wuttke
11:39 Feature #606: Restore automatic doxygen API generation: make clear that this concerns the master branch wuttke
11:36 Bug #1070: Unix should install to /usr/local/lib, not to versioned subdirectory: Discussed today. No fundamental objections - but beware of possible side effects:
* MacOS
* header files, C++ examp... wuttke
11:31 Documentation #1104 (Rejected): don't use version-dependent URLs in the online docs: Much simpler solution is already implemented: use a few variables in Drupal.
To set them: Drupal > Admin > Structu... wuttke

30 May 2016

22:18 Refactoring #1440 (Archived): cover Python examples by functional tests: Test should check that all examples execute without failure, and that they produce about the same detector image as b... wuttke
16:21 Bug #1439 (Resolved): put PythonAPI under CMake control: Currently, when API has changed, one needs to rm Core/PythonAPI/lib*. We should put the generation of these wrappers ... wuttke
16:18 Refactoring #1432: final polish of polyhedral form factor: rel err now <1e-11 wuttke
16:15 Bug #1423: == eliminate warnings ==: warnings come from cmake-called processes, but not from CMake wuttke
15:15 Documentation #1412: avoid horizontal scrolling in code examples: no clue how to change the font size -> http://drupal.stackexchange.com/questions/202612/ wuttke
13:41 Refactoring #1071 (Resolved): Example scripts: No global import from Python module bornagain: Resolved in 3b5d014b0, using the regular expressions appended below, plus very little hand editing.
All scripts in... wuttke
13:34 Refactoring #1071 (Sprint): Example scripts: No global import from Python module bornagain: wuttke
13:33 Documentation #1437 (Rejected): Release requirement: Update example scripts: During a sprint, examples are updated in Examples/python/...
Upon release, they need to be moved to the Drupal sit... wuttke
13:19 Bug #1436 (Archived): repair ex06_Miscellaneous/AccessingSimulationResults.py: type object 'IHist...: broken after past refactoring
$ p2 AccessingSimulationResults.py
Traceback (most recent call last):
File "Acc... wuttke
11:13 Documentation #1360: reequilibrate hierarchy levels in online docs: no objections raised, so we go for it wuttke
11:01 Bug #900: Custom form factors in python do not work with multithreading: Suggestion: Declare this a feature, update the documentation of CustomFormFactor, and close this issue. Serious work ... wuttke
10:18 Bug #1070: Unix should install to /usr/local/lib, not to versioned subdirectory: probably strong interdependence with #1256 wuttke
10:16 Bug #1070 (Rfc): Unix should install to /usr/local/lib, not to versioned subdirectory: wuttke
10:12 Documentation #1104 (Rfc): don't use version-dependent URLs in the online docs: wuttke

25 May 2016

16:31 Refactoring #1296 (Resolved): update internal information about performance tests: Information in README files updated.
Wiki main page provides links to README files. wuttke
15:38 Feature #1290: === Core: framework ===: To keep the code base readable and maintainable wuttke

17 May 2016

14:13 Refactoring #1428 (Backlog): Compactify code that handles parameters (use abstract mechanism inst...: agreed in meeting today wuttke
14:13 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: By convention, all lengths are in nm, all angles are internally in rad. Therefore, we only need the physical dimensio... wuttke
14:10 Refactoring #1430 (Resolved): Consider moving FormFactor unit tests to a single functional test: The main concern will be resolved per issue #1433.
Renaming of subdirectories will follow later, when Core/ is res... wuttke
13:59 Refactoring #1433 (Resolved): move massive numeric tests under 'make check' / 'ctest': to be done when the polyhedral FF is stable (#1432) wuttke
13:56 Refactoring #1432 (Rejected): final polish of polyhedral form factor: * specific tests for frusta that are true pyramids
* exact treatment of vertices that coincide
* -improve edge sum ... wuttke
11:42 Documentation #1431 (Resolved): simplify cross-referencing using package cleveref: wuttke

13 May 2016

17:10 Feature #1238: nicer layout for newsletter@bornagainproject.org (reopened: v1.6.0 round mail stil...: I really do not like the black topbar.
Plain ASCII would be nicer than this HTML. wuttke
13:53 Refactoring #1424: reduce verbosity of googletest output: Feature request submitted at https://github.com/google/googletest/issues/771. wuttke

12 May 2016

13:21 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: So I withdraw default units from the current proposal. Are units acceptable for you? wuttke
13:12 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: Maybe this issue should also be split: default values vs units herck
13:11 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: > > It's not their responsibility.
>
> We are free to assign responsibilities to our creatures as we deem appropri... herck
13:01 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: So yes, you want users to get default parametrized items. OK, I accept.
> Core form factors should not have any de... wuttke
12:38 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: In GUI default values should be provided to reduce amount of clicks/typing. This allows to start a simulation with a ... pospelov
11:59 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: The very first question then: Is it actually appropriate for the GUI to assign default parameters to newly created it... wuttke
11:43 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: The {FF}Items need default values because the GUI needs to create them without user initialization. There is no need ... herck
11:39 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: interesting consequence. why not? wuttke
10:57 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: > Each parameter should have a default value
What does it mean? "new FormFactorSphere()" becomes valid and becom... pospelov
13:16 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: The number 200k comes from arbitrary choices and can be changed if time is a concern.
The tests are concerned with... wuttke
13:00 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: I also agree that these tests conceptually do not belong to unit tests. It also obscures unit test coverage (having 2... herck
12:54 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: My previous reply disappeared since you commented same record I was commenting.
> Why do we actually have a functi... pospelov
12:42 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: > [ RUN] OK is better than just [——]
Agree. Implemented in 91d8e8f5b0. wuttke
12:36 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: Nothing in googletest says it is limited to unit tests, let alone to unit tests in the most narrow sense. Why do we a... wuttke
12:31 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: I put two issues in one, that's true. The major issue is to move Unit to Functional. pospelov
12:09 Refactoring #1430: Consider moving FormFactor unit tests to a single functional test: These are two different issues:
* Move extensive ff tests from Unit to Functional?
* Don't split Core/Unit tests in... wuttke
10:43 Refactoring #1430 (Resolved): Consider moving FormFactor unit tests to a single functional test: I think that tests of form factor behaviour near singularity and along symmetry axes belongs to the functional tests,... pospelov

11 May 2016

18:28 Bug #1371: presence of some boost components not checked by cmake: Btw: testing under Debian is somewhat difficult because of the non-standard packaging of Boost. Reported at https://b... wuttke
17:39 Bug #1371 (Resolved): presence of some boost components not checked by cmake: Resolved in ac0d39e, using a patched FindBoost.cmake that is to be submitted to CMake: https://github.com/rleigh-dund... wuttke
18:10 Refactoring #1366: Revise boost libraries usage: Migration of regex from Boost to regex is suspended because compilers are not ready. => commit d14b964d17bb wuttke
17:34 Refactoring #1366: Revise boost libraries usage: Only now enacted the deletion of boost components regex and thread in cmake/modules/SearchInstalledSoftware.cmake. wuttke
14:36 Refactoring #1424 (Resolved): reduce verbosity of googletest output: wuttke
14:36 Refactoring #1424: reduce verbosity of googletest output: Solved in rather unexpected way in 24204e5, namely by brutally patching gtest. Inheriting outside gtest.cc from the d... wuttke
13:07 Bug #1429 (Resolved): Unit tests files are not shown in Qt Creator IDE: Solved in 03d6c5d, using 'add_custom_target' as suggested in http://stackoverflow.com/questions/28384935/qtcreator-cm... wuttke
08:48 Bug #1429 (Archived): Unit tests files are not shown in Qt Creator IDE: Files from UnitTests/TestCore directory (and similar) are not shown in "Project Structure" by Qt creator IDE. It is n... pospelov
12:39 Refactoring #1428: Compactify code that handles parameters (use abstract mechanism instead of tre...: To automatically generate Python constructors,
* either use named arguments
* or make sure that parameters are orde... wuttke

10 May 2016

14:08 Refactoring #1428 (Archived): Compactify code that handles parameters (use abstract mechanism ins...: Each parameter should have -a default value and- a -unit- physical dimension, assigned upon registration.
This wil... wuttke
12:47 Documentation #1279 (Archived): Inkscape tasks: wuttke
12:46 Documentation #1280 (Resolved): draw tetrahedron as seen from -x: Completed in 4003c83. wuttke

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