Activity

From 27 Jun 2016 to 26 Jul 2016

26 Jul 2016

19:40 Refactoring #1469: Package Multifit-Suite as separate library: Halted after bbac161 (minor cleanup, and split of Fit/ into four directories with clear include hierarchy)
wuttke
09:19 Refactoring #1469: Package Multifit-Suite as separate library: started with some easy refactoring wuttke
19:36 Feature #1513 (Resolved): Provide more informational throw message from RealParameterWrapper.: ... followed and concluded by simplification of ParameterPool in 9c8e6d. wuttke
18:19 Feature #1513: Provide more informational throw message from RealParameterWrapper.: Resolved in 32e8204d0d4: RealParameterWrapper now has parameter m_name. wuttke
07:43 Feature #1513 (Sprint): Provide more informational throw message from RealParameterWrapper.: wuttke
14:33 Feature #1537 (Rejected): parametrize Gaussians and Lorentzians by mean and fwhm: Whenever possible, different models should use common parameters.
For instance, different distribution functions mig... wuttke
08:07 Refactoring #1419 (Resolved): move test code out of core: qGenerator.h has been removed since long.
TestMachinery/ has been moved to Test/Functional/ a few days ago.
Sta... wuttke
08:03 Feature #587: Fit: investigate objective function alternatives: the field is called "Priority", not "Importance" wuttke
07:57 Feature #587 (Long Term Idea): Fit: investigate objective function alternatives: wuttke
08:03 Feature #586: Investigate chi2-like objective functions: the field is called "Priority", not "Importance" wuttke
08:02 Configuration #1536 (Resolved): prevent Drupal from sending HTML mails with black horizontal head...: this was supposed to be solved in Sprint 31, but I continue to get such mails wuttke
07:52 Refactoring #1535 (Rejected): rm intermediate directory 'coregui': Currently, GUI/ contains only a few small directories, plus coregui/, which in turn contains the more important direc... wuttke
07:42 Refactoring #1428 (Sprint): Compactify code that handles parameters (use abstract mechanism inste...: I started with simplifying the interface IParameterized (branch 'parunit') ... wuttke

25 Jul 2016

19:29 Feature #1534 (Rejected): === Parameter handling ===: Parameter handling needs a separate envelope tasks, because it cannot be subsumed under Core, Fit, or GUI: it concern... wuttke
18:43 Refactoring #1527 (Resolved): simplify containsMagneticMaterial, printSampleTree, genPyScript: Resolved in 9e708f4af; ISampleVisitor no longer needed in Core. wuttke
17:01 Refactoring #1514 (Resolved): Remove code duplication in Distributions.h and .cpp: herck

23 Jul 2016

15:44 Feature #1533 (Rejected): implement missing Python export for MesoCrystal: If I see correctly, export to Python fails if the sample contains a MesoCrystal. wuttke

22 Jul 2016

16:31 Refactoring #1527: simplify containsMagneticMaterial, printSampleTree, genPyScript: For containsMagneticMaterial, reimplementation went smoothly in no more than 20 lines, cff2abd. wuttke
09:44 Refactoring #1527 (Archived): simplify containsMagneticMaterial, printSampleTree, genPyScript: Try a lighter way to iterate through the children of a Sample. The current implementation of ISample::containsMagneti... wuttke
16:00 Refactoring #1532 (Rejected): clarify relation of PolDWBAMagCylinders2 and StandardSimulations/St...: wuttke
12:23 Refactoring #1526 (Resolved): replace "FunctionalTest" by more specific terms in several test mac...: Resolved in f5720767e. wuttke
11:37 Refactoring #1526: replace "FunctionalTest" by more specific terms in several test machinery classes: And rename FooTestSuite -> FooStandardTest, because it does not run a suite of tests, but one single test, taken from... wuttke
09:37 Refactoring #1526 (Sprint): replace "FunctionalTest" by more specific terms in several test machi...: wuttke
11:22 Feature #1004: GUI: revise tooltips in all GUI elements: Revise mechanism of storing tooltips in GUI.
Currently tooltips are stored/handled
* in corresponding SessionIt... pospelov
09:33 Bug #1509: Version string should be different for executables generated from 'develop', from feat...: this modification should also be propagated to the Doxyfiles wuttke
09:02 Refactoring #1419 (Sprint): move test code out of core: wuttke
09:00 Feature #601 (Rejected): === Investigate OpenMP/MPI/GPU ===: last open issue moved under #284: Fit wuttke
08:57 Feature #1290: === Core: framework ===: All tasks concerned with the simulation framework, not with the physical modeling (which goes under #1438) wuttke

21 Jul 2016

16:07 Refactoring #1526 (Archived): replace "FunctionalTest" by more specific terms in several test mac...: CoreTestSuite and GUITestSuite reside under Test/Functional, and inherit from FunctionalTestSuite.
They take a subte... wuttke
13:59 Feature #1525: consider parameters of types int, enum, bool: By enum I mean a finite set of keywords. This must not imply implementation using the C/C++ 'enum' datatype. wuttke
13:23 Feature #1525: consider parameters of types int, enum, bool: Enums are famous code smells in OO code. We already have too many of these.
Parameterizing the distribution for such... herck
12:22 Feature #1525 (Rejected): consider parameters of types int, enum, bool: Parameters of types enum would allow us to merge physical models, provided they have the same number of parameters, a... wuttke
13:27 Refactoring #1497 (Sprint): Agree on new Core directory structure and class renaming to Rename ce...: pospelov
11:51 Refactoring #1524 (Resolved): "FitSuite" currently used in two different meanings: Resolved in 2a2856a wuttke
11:22 Refactoring #1524 (Archived): "FitSuite" currently used in two different meanings: "FitSuite" is a collection of fit routines, wrapped under a common API.
Currently, the name "FitSuite" is also use... wuttke
10:00 Feature #1475 (Sprint): DOI for BornAgain: Seems easy once we are at GitHub. wuttke
09:56 Feature #1462 (Rejected): enforce zero tolerance for warnings: This question will naturally come up again when configuring the build server. No need to keep this issue open here. wuttke
09:54 Bug #1070 (Rejected): Unix should install to /usr/local/lib, not to versioned subdirectory: merged into #1476 wuttke
09:54 Refactoring #1476: Revise installation directory structure under Linux: I'll close #1070, which essentially said:
- Unix should install to /usr/local/lib, not to versioned subdirectory
... wuttke

20 Jul 2016

16:58 Configuration #1447 (Sprint): Migrate to GitHub: pospelov
10:57 Bug #1511 (Resolved): Roughness simulations give incorrect scattering contribution below the samp...: herck

19 Jul 2016

16:24 Documentation #1523 (Resolved): explain numeric value of HomogeneousMagneticMaterial::m_magnetic_...: numeric value in the code comes without any explanation wuttke
16:13 Documentation #1522 (Resolved): Create python example with polarized neutrons and magnetic materials: We do not have an example in Examples/python for polarized neutron case.
Withing this item
* create user example ... pospelov
15:49 Refactoring #1487 (Sprint): GUI: introduce ROI (region of interest) in MaskEditor: pospelov
15:48 Feature #1478 (Sprint): Refactor FitParameterLinked to provide simultaneous fit of several sample...: pospelov
15:48 Refactoring #1489 (Sprint): Build: refactor fix_apple_bundle for the production of MacOS installer: pospelov
15:47 Bug #1498 (Sprint): Fitting in GUI: values for all fitting parameters are reported as the same: pospelov
15:47 Refactoring #1492 (Sprint): GUI: Unify WarningSignWidget usage across the whole project: pospelov
15:34 Documentation #1014 (Sprint): Parameterization: document simulation with distributed parameters: Basing on experience learned from GISAS school, we need this tutorial soon. It is hard to explain the concept of "S... pospelov
15:24 Feature #1521 (Rejected): GUI: find the way for update notifier to not to rely on CHANGELOG: Our GUI's update notifier works as following:
* on every GUI start, if the user has "online update notification"... pospelov
13:42 Bug #1520 (Archived): GUI: global progress bar seems to be not updating: When user runs a time consuming simulation, global progress bar in lower left corner is not updating. The normal pr... pospelov

18 Jul 2016

18:46 Documentation #1519 (Rejected): Linking failure of Ubuntu with Python installed via Anaconda bundle: Found an Ubuntu, there in addition to system Python there are two Anaconda's Python2 and Python3 bundles, all in PA... pospelov
18:28 Bug #1518 (Rejected): Build failure on Ubuntu with static version of fftw3 library: Found the Linux with fftw3 installed twice:
* in normal way via the package manager in /usr/lib, shared version ... pospelov
18:06 Documentation #1517 (Archived): Add the case with missed msvc2015 runtime library on Windows syst...: * see #1516
* also mention the case on Drupal's "Windows install instruction"
pospelov
18:04 Bug #1516 (Archived): Consider include of ms-win-runtime library into Windows installer: During GISAS tutorial 5 Windows laptops (out of 20) didn't have api-ms-win-crt-runtime-l1-1-0.dll library installed... pospelov

15 Jul 2016

13:12 Bug #1512 (Resolved): GUI crashes when simulating for a lognormal distribution of wavelength with...: pospelov
09:38 Bug #1515 (Rejected): GUI: error in determination of size of imported tiff file causes crash of f...: How to reproduce:
1. Start BornAgain (1.6.1, hotfix)
2. Instrument-> Set nbins=981 (phi) and nbins=1043 (alpha)
3.... ganeva

14 Jul 2016

16:24 Refactoring #1514 (Archived): Remove code duplication in Distributions.h and .cpp: herck
15:20 Feature #1513 (Archived): Provide more informational throw message from RealParameterWrapper.: Currently it throws with "Value not in range", so in GUI it is almost useless. Ideally it should give the name of p... pospelov

13 Jul 2016

20:18 Bug #1512 (Archived): GUI crashes when simulating for a lognormal distribution of wavelength with...: Reproduce:
Use cylinders and prisms example, create wavelength distribution log normal and set scale parameter to ze... herck
14:41 Bug #1511 (Archived): Roughness simulations give incorrect scattering contribution below the samp...: herck
11:58 Feature #1508: GUI JobView: reconsider location of activity view switch: However, before this can be set back to low priority, the tutorial should be updated to what is actually implemented ... wuttke
11:34 Feature #1508: GUI JobView: reconsider location of activity view switch: Perhaps then the solution will emerge from a larger reshuffling. Let's keep this issue with low priority and see how ... wuttke

12 Jul 2016

23:21 Refactoring #1484 (Sprint): GUI: refactor InstrumentItem and DetectorItem: pospelov
23:21 Refactoring #1485 (Sprint): GUI: refactor InstrumentView: pospelov
23:20 Refactoring #1486 (Sprint): GUI: refactor SampleView: pospelov
21:13 Refactoring #1486: GUI: refactor SampleView: In general, my idea to have same dock menu switch, as in JobView (very right bottom corner). So the right-bottom co... pospelov
20:21 Refactoring #1486: GUI: refactor SampleView: Adding here Joachim's comments
By default (unless overwritten by more specific behavior) a right click pops ... pospelov
23:20 Refactoring #1488 (Sprint): GUI: provide integration of ImportDataView and InstrumentView: pospelov
23:20 Refactoring #1490 (Sprint): GUI: refactor JobView and IntensityData widgets: pospelov
21:00 Feature #1504: GUI: support standard control keys: This item should be extended to something more global. We can summarize here all shortcuts we have by now, and all ... pospelov
09:30 Feature #1504 (Backlog): GUI: support standard control keys: * ^A: select all wigets
* ^V: paste previously cut widget(s)
* ^X: cut selected widget(s)
* ^Z: revert last action... wuttke
20:43 Feature #1503: GUI: provide intuitive way to insert layer into multilayer: Here are some clarifications:
You can drag-and-drop "Layer" from ItemsToolBox into a MultiLayer, when move it ou... pospelov
09:26 Feature #1503 (Rejected): GUI: provide intuitive way to insert layer into multilayer: Trying out the GUI in impatient beginner's mode (i.e. without reading the tutorial), I found the following:
Starti... wuttke
20:30 Feature #1505 (Rejected): GUI: move windows menu from right-click-popup to topbar "Windows" pulldown: I have moved your comment into #1486, where among other things I'm going to address this one too.
Let me reject th... pospelov
10:09 Feature #1505 (Rejected): GUI: move windows menu from right-click-popup to topbar "Windows" pulldown: By default (unless overwritten by more specific behavior) a right click pops up a menu window that allows to choose w... wuttke
20:16 Feature #1508: GUI JobView: reconsider location of activity view switch: True, tutorial was not updated yet. I also agree, that lower right corner is not most intuitive place. The problem ... pospelov
12:07 Feature #1508 (Rejected): GUI JobView: reconsider location of activity view switch: Current location of button that activates the Job View Activity menu is at bottom right.
This it at variance from ... wuttke
19:54 Feature #1510 (Rejected): replace "Houston, we have a problem": I added this task into bigger issue #1492. Rejecting this one.
pospelov
14:34 Feature #1510 (Rejected): replace "Houston, we have a problem": funny enough for the lifetime of one release, but not the permanent solution, I suppose wuttke
19:49 Feature #1506: GUI Sample Tree View: cut / paste or move to be added to right-click popup menu: The "move" functionality was there already (not as a context menu, but rather natural hold-click-and-move), but was... pospelov
10:14 Feature #1506 (Backlog): GUI Sample Tree View: cut / paste or move to be added to right-click pop...: The ight-click popup menu in the Sample Tree View should provide a means to move items around. Either using a cut/pas... wuttke
15:41 Refactoring #1477 (Resolved): Provide more detailed info on Exception thrown from Polyhedron base...: Resolved in 7450e48. wuttke
15:30 Refactoring #1477 (Sprint): Provide more detailed info on Exception thrown from Polyhedron based ...: wuttke
14:30 Bug #1509 (Resolved): Version string should be different for executables generated from 'develop'...: This we have discussed previously, but I have to come back to it:
An executable that differs, at times even consid... wuttke
11:41 Documentation #840: Website: provide movie with GUI tutorial: I removed the following from http://bornagainproject.org/documentation/usage/gui: »The following video presents how t... wuttke
11:34 Feature #1507 (Backlog): GUI: Sample builder & editor: SHIFT+LeftClick should add to selection: In Sample Editor and Sample Tree View, LeftClick selects one item.
As per de factor standard for GUI behavior, SHI... wuttke

11 Jul 2016

14:05 Feature #1238: nicer layout for newsletter@bornagainproject.org (reopened: v1.6.0 round mail stil...: reopened: round mail announcing v1.6.0 still had black bars, and no horizontal margin wuttke
13:22 Configuration #1502 (Rejected): rebase all branches after release (change release script or instr...: 'develop' and any living feature branch should at any time contain the common history at least up to the latest relea... wuttke
12:58 Configuration #1501 (Archived): version tag must start with 'v' (change release script or instruc...: Per agreement with Cristiano Feldero, version tags should always start with 'v'. Hence 'v1.6.0', not '1.6.0'.
Is t... wuttke

01 Jul 2016

15:00 Refactoring #1497 (Rfc): Agree on new Core directory structure and class renaming to Rename certa...: pospelov
14:48 Refactoring #1497: Agree on new Core directory structure and class renaming to Rename certain cla...: I fully agree that these type of tasks should wait until we have a reasonably good working CI and nightly build proce... herck
14:23 Refactoring #1497 (Rejected): Agree on new Core directory structure and class renaming to Rename ...: Within this item we have to agree on
* new Core directory structure (how to split, new directory names)
** Joachi... pospelov
14:46 Configuration #1348 (Rejected): Buildbot: install agent on scgmini and attach Mavericks/Yosemite/...: Already covered in #1344 herck
14:45 Configuration #1344: MacOS: install buildslave to macmini: Needed:
Mavericks, Yosemite, El Capitan herck
13:56 Configuration #1496 (Rejected): Switch Windows10 buildslave from virtual box to vagrant box: herck
13:50 Refactoring #1495 (Backlog): GUI: extend GUISuite functional test machinery with standard fits: We have to make sure, that translation of fit parameters between GUI and domain
is working properly. pospelov
13:50 Refactoring #1494 (Backlog): GUI: Implement export of fitting setup to python script.: This is a heavy item. It is not even clear how to do it.
pospelov
13:50 Refactoring #1493 (Backlog): GUI: Implement tranform from domain for fitting objects: pospelov
13:49 Refactoring #1492 (Resolved): GUI: Unify WarningSignWidget usage across the whole project: We use WarningSignWidget (small yellow triangle) in different widgets under similar scenarios, but having lots of du... pospelov
13:49 Refactoring #1491 (Rejected): GUI: improve GUI fitting performance: For the moment fitting with GUI eats only 60% CPU, it means that significant part we spend in GUI's single thread by ... pospelov
13:48 Refactoring #1490 (Resolved): GUI: refactor JobView and IntensityData widgets: * -get rid of ColorMapPlot-
* -create new widget for projections-
** -take care of auto margins in QCustomPlot-
* ... pospelov
13:48 Refactoring #1489 (Rejected): Build: refactor fix_apple_bundle for the production of MacOS installer: The main problem, is that it can't distinguish, whever Qt dependencies are hardcoded in BornAgain binary
(which is n... pospelov
13:48 Refactoring #1488 (Archived): GUI: provide integration of ImportDataView and InstrumentView: This is a heavy item which requires the following
* -Embed mask editor into ImportDataView-
* Make FitSuite respe... pospelov
13:47 Refactoring #1487 (Archived): GUI: introduce ROI (region of interest) in MaskEditor: The idea is that when it comes to importing real data, the most common operation is
to set up region of interest, wh... pospelov
13:47 Refactoring #1486 (Resolved): GUI: refactor SampleView: * -switch to the dock structure as in JobView-
* -make SampleViewDocks (to be created) and JobViewDocks relying on s... pospelov
13:46 Refactoring #1485 (Resolved): GUI: refactor InstrumentView: * switch to the usage of common ItemStackPresenter to avoid code duplication
* split responsibilities: separate acti... pospelov
13:46 Refactoring #1484 (Resolved): GUI: refactor InstrumentItem and DetectorItem: * Introduce DetectorContainerItem
* introduce common base DetectorItem for SphericalDetectorItem and RectangularDete... pospelov
13:45 Feature #1308 (Rejected): GUI: take care about margins in ColorMapPlot: Will be fixed in the context of JobView refactoring pospelov
13:44 Configuration #1483 (Rejected): Fix shuwdown of Windows10 build slave: The build slave for Windows10 builds does not seem to shutdown properly. As a result, it keeps running and buildmaste... herck
13:42 Configuration #1482 (Rejected): Investigate forced build on buildbot, parameterized by <branch>: At first stage, only Linux.
This could help testing before merging, but also for releasing, where we need to test/ge... herck
13:39 Configuration #1481 (Rejected): Buildbot: provide tutorial how to add new build configuration: MacOS: For the moment the knowledge mostly in Jan's hands, we need good tutorial on BornAgain redmine wiki, so everybody cou... herck
13:39 Configuration #1480 (Rejected): Buildbot: provide tutorial how to add new build configuration: Wi...: For the moment the knowledge mostly in Jan's hands, we need good tutorial on BornAgain redmine wiki, so everybody cou... herck
13:04 Refactoring #1476: Revise installation directory structure under Linux: I thinks this item, as well as #1070 should be replaced with one, single, well planned item - "Refactor installatio... pospelov
12:50 Refactoring #1065: Revise particle form factors: change names, add few form factors, change some ...: Split into separate issues herck
12:49 Bug #1448 (Rejected): Remove html directory from source tarball: so it was a mistake during hotfix procedure. Nothing to be done here. pospelov
12:47 Configuration #1447 (Backlog): Migrate to GitHub: I think we have to move to github/gitlab with pull requests as soon as possible. pospelov

30 Jun 2016

10:42 Configuration #1350 (Resolved): Buildbot: provide set of configurations for buildbot-based BornAg...: Arch and the two Ubuntu systems are in place. Fedora (or another option) will be configured during the next sprint. herck
09:28 Bug #1436 (Resolved): repair ex06_Miscellaneous/AccessingSimulationResults.py: type object 'IHist...: Replaced "enum class DataType" to "enum DataType" in IHistogram. We have to be careful with enums which are intende... pospelov
09:26 Bug #1436 (Sprint): repair ex06_Miscellaneous/AccessingSimulationResults.py: type object 'IHistog...: pospelov
08:13 Configuration #1150 (Backlog): Improve release script procedure: pospelov
08:13 Configuration #1344 (Backlog): MacOS: install buildslave to macmini: pospelov
08:12 Feature #1349 (Backlog): Buildbot: provide tutorial how to add new build configuration: Linux: pospelov
08:12 Configuration #1348 (Backlog): Buildbot: install agent on scgmini and attach Mavericks/Yosemite/E...: pospelov
08:12 Configuration #1255 (Backlog): MacOS: provide vagrant build configurations for Mavericks: pospelov
08:12 Configuration #1175 (Backlog): Installer: Linux: Provide official debian package: pospelov

29 Jun 2016

17:33 Feature #1408 (Resolved): GUI: refactor/beautify/finalize FitWidget: For the moment it's good enough to start showing to the users. Still lots of things has to be done, but it will be a ... pospelov

28 Jun 2016

14:13 Refactoring #1479 (Backlog): presence of some boost components not checked by cmake: herck
14:12 Refactoring #1479 (Rejected): presence of some boost components not checked by cmake: See #1371
Fix implemented for that issue did not work for us, because it uses keywords not present in cmake 2.8.12 (... herck

27 Jun 2016

10:42 Feature #1478 (Resolved): Refactor FitParameterLinked to provide simultaneous fit of several samp...: Current FitParameterLinked item is able to steer several RealParameterWrapper. The idea is that we can fit several ... pospelov
09:34 Bug #1465 (Resolved): Repair MacOS cmake machinery: ganeva

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