Activity

From 18 Feb 2018 to 19 Mar 2018

14 Mar 2018

17:44 Refactoring #2011 (New): API changes to access the simulation results: Request: plot simulated and experimental data together in the same units, the same scale, with the same ROI and the s... ganeva
15:40 Feature #1846 (Resolved): Investigate the effort to implement 3d correlations of particles in DWBA: First theoretical investigation done. Result can be found in 'gisas' repositore under theory/Interference_3D
Next st... herck
10:35 Bug #2009: qwindowsvistatsyle.dll cannot be found under Qt5.9.3 on windows: I still will disable this library installation for older Qt versions and add warning for developers. dmitry
10:25 Bug #2010 (Sprint): cmake should notify user if eigen3 is not found: herck
10:22 Bug #2010 (Resolved): cmake should notify user if eigen3 is not found: For the moment, if eigen3 is not in the BornAgain/ThirdParty, cmake runs successfully, but compilation fails with an ... ganeva

13 Mar 2018

17:40 Bug #2009 (Rejected): qwindowsvistatsyle.dll cannot be found under Qt5.9.3 on windows: This issue is known. Since we only provide installers for Windows systems, and these are build with Qt5.10, this pose... herck

12 Mar 2018

21:32 Bug #2009 (Rejected): qwindowsvistatsyle.dll cannot be found under Qt5.9.3 on windows: Probably, because it is not a separate library until Qt5.10.0.
Output from @CPack -C Release@:
CPack -C Release... dmitry
17:02 Bug #2008 (Resolved): GUI->Fitting: ROI in experimental data causes NaN fitting parameters: Presence of the ROI in the experimental data causes the following error message by fitting:
`FitParameterSet::setVal... ganeva

09 Mar 2018

15:42 Bug #2007 (Sprint): GUI->Instrument view-> entering floating point numbers: herck
15:33 Bug #2007: GUI->Instrument view-> entering floating point numbers: Also observed on Ubuntu 17.10 dmitry
14:30 Bug #2007 (Resolved): GUI->Instrument view-> entering floating point numbers: Entering of the floating point numbers is very inconvenient. It is impossible now to enter a number 1.2345 at once, s... ganeva
09:00 Feature #2006 (Resolved): Core: implement instrument type for depth probes (evanescent wave): Possible name?
* DepthProbeInstrument
* EvanescentWaveInstrument
pospelov
08:58 Feature #926 (Sprint): Provide evanescent wave python example: pospelov
08:56 Documentation #2005 (Resolved): Website: switch bornagainproject.org to the new website: pospelov
08:50 Documentation #2004 (Backlog): Website: style doxygen generated API to the new website: pospelov
08:49 Documentation #2003 (Backlog): Website: integrate doxygen generated API to Hugo: pospelov
08:49 Documentation #2002 (Resolved): Website: port all release letters: pospelov
08:47 Documentation #2001 (Resolved): Website: port "functionality overview" to Hugo: * Port http://bornagainproject.org/documentation/functionality_overview
* Revise the content and add new function... pospelov

07 Mar 2018

13:24 Feature #1974 (Resolved): Provide full-fledged functionality for specular simulation in DomainSim...: dmitry
13:18 Bug #1998 (Sprint): Wrong number of samples displayed in distribution widget for cosine distribution: dmitry
13:16 Feature #2000 (Backlog): Use rpath in Linux installation for our own binaries: * Configure CMake so it install rpath to BornAgain executable and libBornAgain*.so family
* Remove BornAgain insta... pospelov
13:13 Refactoring #1476 (Sprint): Revise installation directory structure under Linux: pospelov
12:08 Refactoring #1995 (Resolved): Remove obsolete Find<library> files in cmake/generic/modules: herck
10:41 Documentation #1999 (Backlog): Cleanup redmine wiki: * Remove all obsolete instructions: done
* Update outdated sections (they are marked OUTDATED in the main wiki)
pospelov

05 Mar 2018

18:05 Bug #1998 (Rejected): Wrong number of samples displayed in distribution widget for cosine distrib...: dmitry

02 Mar 2018

14:26 Feature #1855 (Resolved): Modify installation instructions for Win and MacOS to stress forthcomin...: pospelov
13:59 Documentation #1852 (Resolved): Remove Eigen3 dependency on BornAgain website before releasing: pospelov
13:59 Refactoring #1918 (Backlog): Revise IHistogram class family: Possible improvements (to be discussed):
* Remove dependency on dimensions from IHistogram class
* Provide a wa... pospelov
12:01 Bug #1997 (Resolved): GUI: fit view shows experimental/simulated data in different scale: * altough, it is possible to set same min/max for experimental/simulated manually
pospelov
11:16 Feature #1996 (Backlog): Add to the GUI build time in About section: * It will help us not to mess up different installers with same name in the day of the release pospelov
10:26 Refactoring #1995 (Resolved): Remove obsolete Find<library> files in cmake/generic/modules: herck
10:18 Bug #1980 (Resolved): GUI: fitting of incident angle: herck

01 Mar 2018

17:17 Bug #1978 (Resolved): GUI on mac os x: Number of MC points drops to zero: herck
16:20 Feature #853 (Rejected): Provide particles with size distribution in GUI: Rejected to not to spoil backlog. #1019 still remains pospelov
16:20 Feature #1019 (Sprint): Extend GUI ParticleDistribution with linked parameters: pospelov
16:17 Refactoring #1489 (Rejected): Build: refactor fix_apple_bundle for the production of MacOS installer: was fixed during Python3 installer preparation for MacOS pospelov
16:15 Feature #1675 (Sprint): Get rid of ctypes.addressof in PySampleBuilder: At least investigate the possibility pospelov
16:12 Feature #1994 (Backlog): Enable automatic conversion of parameter values/limits between GUI and C...: More specifically: if an angle is used as a fit parameter, it's GUI values (degrees) are converted to radians for the... herck
15:21 Bug #1977 (Resolved): GUI on mac os x: Python script view window cannot be resized: pospelov
15:21 Bug #1986 (Resolved): GUI: splitter between ColorMap and RealTimeWidget jumps on parameter tuning: pospelov
13:54 Bug #1981 (Resolved): BornAgain GUI: cannot fit beam parameters with distributions: dmitry
13:54 Bug #1981: BornAgain GUI: cannot fit beam parameters with distributions: The functionality for fitting beam parameters with distributions was temporarily disabled. After the completion of th... dmitry

28 Feb 2018

21:07 Bug #1982 (Resolved): GUI: fit of particles with size distributions causes negative values: pospelov
12:50 Bug #1982 (Sprint): GUI: fit of particles with size distributions causes negative values: pospelov
18:40 Bug #1991 (Sprint): Cannot add real data to off-specular instrument: dmitry
16:12 Bug #1991 (Resolved): Cannot add real data to off-specular instrument: After running off-spec simulation, attempt to bind simulation to its result previously saved on disk, one gets an err... dmitry
17:46 Bug #1993: Plot ticks are not updated if axes changed in real time view: I mean, rescaled without updating axes ticks dmitry
17:45 Bug #1993 (Resolved): Plot ticks are not updated if axes changed in real time view: Seems that simulation result is just rescaled while changing axis limits in real time view (see pictures attached) dmitry
17:30 Bug #1989 (Rejected): BornAgain crash after loading different project: Can't reproduce anymore. herck
13:55 Bug #1989 (Rejected): BornAgain crash after loading different project: To reproduce:
Open project
Change some stuff (like in real time view)
Push button 'Open Project' in Welcome view
... herck
16:18 Feature #1992 (Backlog): Revise RealTimeView: * beautify the code
* make sure that non-fitable properties are different from others and can't be fitted pospelov
14:08 Refactoring #1990 (Backlog): Remove duplicate type definitions in BornAgainNamespace.h and item_c...: herck
14:00 Bug #1981 (Sprint): BornAgain GUI: cannot fit beam parameters with distributions: dmitry
13:57 Bug #1979 (Resolved): BornAgain GUI: cannot fit the constant background: dmitry
11:19 Bug #1979 (Sprint): BornAgain GUI: cannot fit the constant background: dmitry
12:49 Bug #1983 (Resolved): GUI crash on project close: pospelov
11:57 Bug #1985 (Resolved): Changing parameter in realtime view switches back to fitview: herck
11:53 Feature #1988 (Backlog): Propagate best fit parameter values to parameter tree and fit parameter ...: Especially when using genetic minimizer, the last results are not necessarily the optimal values.
One can see the be... herck

27 Feb 2018

15:28 Refactoring #1987 (Resolved): Replace Qt's foreach with c++ range-based for loop: herck
14:52 Bug #1980: GUI: fitting of incident angle: This bug was already present from the introduction of fitting in the GUI (v1.8). It is caused by the misalignment of ... herck
11:30 Bug #1980 (Resolved): GUI: fitting of incident angle: fitting if the incident angle is possible, but the fit delivers weird simulation results. ganeva
13:57 Bug #1977 (Sprint): GUI on mac os x: Python script view window cannot be resized: pospelov
11:13 Bug #1977 (Resolved): GUI on mac os x: Python script view window cannot be resized: Python scripy view window, which appears after click on Simulation->Export to Python script cannot be resized on mac ... ganeva
12:24 Bug #1986 (Resolved): GUI: splitter between ColorMap and RealTimeWidget jumps on parameter tuning: * At least on Mac
pospelov
12:21 Bug #1985 (Resolved): Changing parameter in realtime view switches back to fitview: Reproduce:
Run a fit
Change parameter in realtime view and press <Enter>
GUI switches to fitview herck
12:19 Bug #1984 (Backlog): GUI: scollaps/expand arrows on InstrumentView are too big on Mac: pospelov
11:58 Bug #1982: GUI: fit of particles with size distributions causes negative values: The problem is deeper here. Even funny.
It seems that RealLimits disappeared from ParticleDistributionItem and onl... pospelov
11:35 Bug #1982 (Resolved): GUI: fit of particles with size distributions causes negative values: fit of particles with size distributions causes tries to assign particle sizes to a negative values (see the attached... ganeva
11:37 Bug #1983 (Resolved): GUI crash on project close: * Project should contain fitting job with parameters defined.
* Then GUI crashes (unexpected quite) after it was a... pospelov
11:33 Bug #1981 (Resolved): BornAgain GUI: cannot fit beam parameters with distributions: fit of beam parameters like wavelength and angles is possible in GUI, but if the parameter has a distribution, the er... ganeva
11:25 Bug #1979 (Resolved): BornAgain GUI: cannot fit the constant background: to reproduce:
create a sample, load some experimental data. In the instrument tab set Environment->Background->const... ganeva
11:20 Bug #1978 (Resolved): GUI on mac os x: Number of MC points drops to zero: to reproduce:
- create a sample (f.e. from one of examples)
- go to Simulation tab and choose the computation metho... ganeva

26 Feb 2018

15:56 Feature #1929 (Resolved): Switch Python3 ON by default: herck

23 Feb 2018

17:46 Feature #1854 (Resolved): Provide Python3 based MacOS installer: pospelov
17:46 Bug #1976 (Resolved): BornAgain GUI style in Windows and MacOS is not flat anymore in Qt5.10: pospelov
09:00 Bug #1976 (Resolved): BornAgain GUI style in Windows and MacOS is not flat anymore in Qt5.10: pospelov
16:16 Feature #1974: Provide full-fledged functionality for specular simulation in DomainSimulationBuilder: Following features must be available from GUI for specular simulation after completion:
1. Wavelength/inclination an... dmitry

22 Feb 2018

21:30 Bug #1975: Failed to import numpy on Windows (in virtual environment): Apparently it happens only if PyCharm project is created in virtual environment.
Steps to reproduce:
* Install An... pospelov
20:54 Bug #1975 (Rejected): Failed to import numpy on Windows (in virtual environment): * BornAgain + Win10 at home + Anaconda + Pycharm... pospelov
20:31 Bug #1913 (Resolved): Thread count issue on Windows on modern CPU: pospelov
16:27 Bug #1970 (Resolved): Rearrange directory structure of Win installer: herck
13:15 Feature #1974 (Resolved): Provide full-fledged functionality for specular simulation in DomainSim...: dmitry
12:59 Bug #1897 (Resolved): warnings from Eigen3: dmitry
11:14 Testing #1965 (Resolved): Provide an example of fitting real reflectometry data with BornAgain: dmitry
10:44 Feature #1869 (Resolved): Implement transform from domain for off-specular instrument: pospelov

21 Feb 2018

14:56 Bug #1973 (Rejected): BornAgain functional tests fail under Python 3.6: Problem proved to be in messing installation/source files. Rejected dmitry
13:40 Bug #1973 (Sprint): BornAgain functional tests fail under Python 3.6: dmitry
13:39 Bug #1973 (Rejected): BornAgain functional tests fail under Python 3.6: 135 - PyExamples/AllFormFactorsAvailable (Failed)
136 - PyExamples/CylindersAndPrisms (Failed)
137 - PyEx... dmitry
11:30 Feature #1972 (Backlog): GUI: provide beam divergence for OffSpec instrument: * Introduce OffSpecBeamItem
* Move alpha_i axis to it
* Review OffSpecBeamEditor
* Create extended distribution ... pospelov
11:26 Documentation #1971 (Backlog): Provide description of fitting engines' options: Currently they are not documented, thus very hard to use dmitry

20 Feb 2018

15:25 Bug #1967 (Rejected): Real time view of specular doesn't work: Cannot reproduce; seems to be working ok now. herck
15:02 Bug #1970 (Resolved): Rearrange directory structure of Win installer: ... pospelov
14:55 Refactoring #1954: Use new unit conversions from core in GUI: Moved to next sprint, because this requires a not so shallow refactoring of some GUI elements that could possibly int... herck
14:41 Documentation #1941 (Resolved): Website: port Python examples section to Hugo: pospelov
12:30 Feature #1955 (Resolved): Revise axes labels in all Python examples: herck
10:24 Feature #1947 (Resolved): Provide MaterialBySLD functional test: dmitry
09:14 Bug #1926 (Resolved): Compilation fails on Windows with Qt 5.10.0: pospelov
09:14 Bug #1926 (Sprint): Compilation fails on Windows with Qt 5.10.0: pospelov
08:54 Bug #1913: Thread count issue on Windows on modern CPU: Current behavior:
* Threads from 1-9 behaves as expected, with CPU load from 6% to 60%
* Threads 10-16 - CPU load... pospelov

19 Feb 2018

19:45 Bug #1913: Thread count issue on Windows on modern CPU: Compiler and linker flags at Gennady's home PC (Ryzen 8 cores)
*Multithreading output*... pospelov
14:12 Bug #1913: Thread count issue on Windows on modern CPU: Created a simple program for testing CPU load when using a variable number of threads:
https://github.com/waltervh/m... herck
18:17 Feature #1969 (Resolved): Enable distribution of inclination angle in off-specular simulation: herck
16:18 Feature #1969 (Resolved): Enable distribution of inclination angle in off-specular simulation: herck
14:25 Bug #1966 (Resolved): GUI crash: switch project after job removal: herck
12:31 Documentation #1946 (Resolved): Revise MaterialBySLD (user interface and documentation): dmitry

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